RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 BSNDQ8WZ55 320 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 ALKBH8Q96BT7 664 aaKnown RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 ZBED3Q96IU2 234 aaPredicted RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 ARHGAP39Q9C0H5 1083 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 RAPGEFL1Q9UHV5 662 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 FZD1Q9UP38 647 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 CPNE3O75131 537 aaKnown RBP9.1□□□□□ -0.95
SHC4-204ENST00000557797 ALX3O95076 343 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 NEFLP07196 543 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 MYL6BP14649 208 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 KIF22Q14807 665 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 TAF1CQ15572 869 aaPredicted RBP9.1□□□□□ -0.95
SHC4-204ENST00000557797 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
SHC4-204ENST00000557797 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 U2AF1L4Q8WU68 220 aaKnown RBP9.1□□□□□ -0.95
SHC4-204ENST00000557797 BRI3BPQ8WY22 251 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 DMRTB1Q96MA1 342 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 TCF12Q99081 682 aa9.1□□□□□ -0.95
SHC4-204ENST00000557797 MYO3BQ8WXR4 1341 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 SYNGAP1Q96PV0 1343 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 HTATSF1O43719 755 aaKnown RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 TLR2O60603 784 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 UFL1O94874 794 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 SASH1O94885 1247 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 SGPL1O95470 568 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 GRK4P32298 578 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 TAF7Q15545 349 aaPredicted RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 DACT2Q5SW24 774 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 FAM117BQ6P1L5 589 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 Q6ZS46 218 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 MCM10Q7L590 875 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 CCNJLQ8IV13 435 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 AGGF1Q8N302 714 aaeCLIP9.09□□□□□ -0.95
SHC4-204ENST00000557797 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 WNT8BQ93098 351 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 DEFB129Q9H1M3 183 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 AKTIPQ9H8T0 292 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 NPHS2Q9NP85 383 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 SEC31BQ9NQW1 1179 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 SRRDQ9UH36 339 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 TRMT112Q9UI30 125 aaKnown RBP9.09□□□□□ -0.95
SHC4-204ENST00000557797 RIPOR2Q9Y4F9 1068 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 PPP2R3BQ9Y5P8 575 aa9.09□□□□□ -0.95
SHC4-204ENST00000557797 GRIA4P48058 902 aa9.08□□□□□ -0.96
SHC4-204ENST00000557797 RPS8P62241 208 aaKnown RBP9.08□□□□□ -0.96
SHC4-204ENST00000557797 KIAA0319Q5VV43 1072 aa9.08□□□□□ -0.96
SHC4-204ENST00000557797 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
SHC4-204ENST00000557797 RTF1Q92541 710 aaKnown RBP9.08□□□□□ -0.96
SHC4-204ENST00000557797 DNAJC25Q9H1X3 360 aa9.08□□□□□ -0.96
SHC4-204ENST00000557797 KNSTRNQ9Y448 316 aa9.08□□□□□ -0.96
SHC4-204ENST00000557797 IRS2Q9Y4H2 1338 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 MAPK1P28482 360 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 MAGEA10P43363 369 aaPredicted RBP9.07□□□□□ -0.96
SHC4-204ENST00000557797 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
SHC4-204ENST00000557797 DSC3Q14574 896 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 SUPT20HL1Q3ZLR7 823 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
SHC4-204ENST00000557797 FAM43AQ8N2R8 423 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 OPTNQ96CV9 577 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 POLR3GLQ9BT43 218 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 LIN7BQ9HAP6 207 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 OSGEPQ9NPF4 335 aa9.07□□□□□ -0.96
SHC4-204ENST00000557797 ZNF804BA4D1E1 1349 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 CCL15-CCL14A0A0B4J2E2 113 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 RBM47A0AV96 593 aaKnown RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 U2SURPO15042 1029 aaKnown RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 DYRK3O43781 588 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 USP2O75604 605 aaPredicted RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 WDHD1O75717 1129 aaPredicted RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 HOXD10P28358 340 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 CTGFP29279 349 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 GTF2A2P52657 109 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 UBXN2AP68543 259 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 CCL15Q16663 113 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 SPRED3Q2MJR0 410 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 MAFAQ8NHW3 353 aaPredicted RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
SHC4-204ENST00000557797 UBASH3BQ8TF42 649 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 SLC7A3Q8WY07 619 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 TP53INP1Q96A56 240 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 SEMA6BQ9H3T3 888 aa9.06□□□□□ -0.96
SHC4-204ENST00000557797 MGAMO43451 1857 aa9.05□□□□□ -0.96
SHC4-204ENST00000557797 A0A096LPE4 126 aa9.05□□□□□ -0.96
SHC4-204ENST00000557797 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
SHC4-204ENST00000557797 TREHO43280 583 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms