RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 TKFCQ3LXA3 575 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 SLC30A10Q6XR72 485 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
LGMN-219ENST00000557725 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 CABYRO75952 493 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 ARHGEF15O94989 841 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 MYL3P08590 195 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 TFF2Q03403 129 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 KRT40Q6A162 431 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 IQSEC1Q6DN90 963 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 COPS5Q92905 334 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
LGMN-219ENST00000557725 GPCPD1Q9NPB8 672 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 SLC4A7Q9Y6M7 1214 aa13.73□□□□□ -0.21
LGMN-219ENST00000557725 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 TTC41PQ6P2S7 1318 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 ZEB2O60315 1214 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 PLA2G6O60733 806 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 ICAM1P05362 532 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 ALDH5A1P51649 535 aaPredicted RBP13.72□□□□□ -0.21
LGMN-219ENST00000557725 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
LGMN-219ENST00000557725 SPRED2Q7Z698 418 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 MORC4Q8TE76 937 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 VTA1Q9NP79 307 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
LGMN-219ENST00000557725 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
LGMN-219ENST00000557725 TNKSO95271 1327 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 ATP2A2P16615 1042 aaKnown RBP13.71□□□□□ -0.21
LGMN-219ENST00000557725 CALML3P27482 149 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
LGMN-219ENST00000557725 DUSP28Q4G0W2 176 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
LGMN-219ENST00000557725 SYDE2Q5VT97 1194 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 OR6J1Q8NGC5 347 aa13.71□□□□□ -0.21
LGMN-219ENST00000557725 MTIF3Q9H2K0 278 aaKnown RBP13.71□□□□□ -0.21
LGMN-219ENST00000557725 SCN10AQ9Y5Y9 1956 aa13.71□□□□□ -0.22
LGMN-219ENST00000557725 SALL3Q9BXA9 1300 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 ERC2O15083 957 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 CA3P07451 260 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 MX1P20591 662 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 NOVP48745 357 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 KCNQ1P51787 676 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 Q9Y3F1 56 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 NCOR1O75376 2440 aa13.7□□□□□ -0.22
LGMN-219ENST00000557725 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
LGMN-219ENST00000557725 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
LGMN-219ENST00000557725 HAND2P61296 217 aa13.69□□□□□ -0.22
LGMN-219ENST00000557725 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
LGMN-219ENST00000557725 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
LGMN-219ENST00000557725 RPUSD2Q8IZ73 545 aaKnown RBP13.69□□□□□ -0.22
LGMN-219ENST00000557725 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
LGMN-219ENST00000557725 ANAPC4Q9UJX5 808 aa13.69□□□□□ -0.22
LGMN-219ENST00000557725 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
LGMN-219ENST00000557725 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
LGMN-219ENST00000557725 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
LGMN-219ENST00000557725 RBM47A0AV96 593 aaKnown RBP13.68□□□□□ -0.22
LGMN-219ENST00000557725 ORC4O43929 436 aa13.68□□□□□ -0.22
LGMN-219ENST00000557725 ARIH2O95376 493 aa13.68□□□□□ -0.22
LGMN-219ENST00000557725 SKIV2LQ15477 1246 aaKnown RBP13.68□□□□□ -0.22
LGMN-219ENST00000557725 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
LGMN-219ENST00000557725 MTG1Q9BT17 334 aaPredicted RBP13.68□□□□□ -0.22
LGMN-219ENST00000557725 POLR3EQ9NVU0 708 aa13.68□□□□□ -0.22
LGMN-219ENST00000557725 FGAP02671 866 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 FGRP09769 529 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 PDHBP11177 359 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 BMP1P13497 986 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 CPT1AP50416 773 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 RPS6P62753 249 aaKnown RBP13.67□□□□□ -0.22
LGMN-219ENST00000557725 USH1GQ495M9 461 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 TMEM67Q5HYA8 995 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
LGMN-219ENST00000557725 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 ADD3Q9UEY8 706 aaKnown RBP13.67□□□□□ -0.22
LGMN-219ENST00000557725 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
LGMN-219ENST00000557725 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
LGMN-219ENST00000557725 PDE4DQ08499 809 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms