RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FBXO11Q86XK2 927 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 FAM133AQ8N9E0 248 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 ANKLE1Q8NAG6 615 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 FBXO22Q8NEZ5 403 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.09
SLIRP-211ENST00000557623 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 USP26Q9BXU7 913 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
SLIRP-211ENST00000557623 CYP39A1Q9NYL5 469 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 DDX20Q9UHI6 824 aaKnown RBP14.52□□□□□ -0.09
SLIRP-211ENST00000557623 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 PTPDC1A2A3K4 754 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 ASB14A6NK59 587 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 ZBTB5O15062 677 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 SEPT4O43236 478 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 FGD1P98174 961 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 RNF207Q6ZRF8 634 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 RGS22Q8NE09 1264 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 CLEC4DQ8WXI8 215 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 AMNQ9BXJ7 453 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 RYDENQ9NUL5 291 aaKnown RBP14.51□□□□□ -0.09
SLIRP-211ENST00000557623 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
SLIRP-211ENST00000557623 OGDHLQ9ULD0 1010 aa14.51□□□□□ -0.09
SLIRP-211ENST00000557623 MRPL11Q9Y3B7 192 aaKnown RBP14.51□□□□□ -0.09
SLIRP-211ENST00000557623 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
SLIRP-211ENST00000557623 NFIBO00712 420 aa14.5□□□□□ -0.09
SLIRP-211ENST00000557623 FARP2O94887 1054 aaPredicted RBP14.5□□□□□ -0.09
SLIRP-211ENST00000557623 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
SLIRP-211ENST00000557623 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
SLIRP-211ENST00000557623 PWP2Q15269 919 aaKnown RBP14.5□□□□□ -0.09
SLIRP-211ENST00000557623 MCF2L2Q86YR7 1114 aa14.5□□□□□ -0.09
SLIRP-211ENST00000557623 TRPV1Q8NER1 839 aa14.5□□□□□ -0.09
SLIRP-211ENST00000557623 MYL10Q9BUA6 226 aa14.5□□□□□ -0.09
SLIRP-211ENST00000557623 SOWAHBA6NEL2 793 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 CNTN2Q02246 1040 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 BAATQ14032 418 aaPredicted RBP14.49□□□□□ -0.09
SLIRP-211ENST00000557623 PRAMEF19Q5SWL8 479 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 ARMCX2Q7L311 632 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 FGD4Q96M96 766 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 MPHOSPH6Q99547 160 aaKnown RBP14.49□□□□□ -0.09
SLIRP-211ENST00000557623 SPZ1Q9BXG8 430 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 ABHD16BQ9H3Z7 469 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
SLIRP-211ENST00000557623 BOLA1Q9Y3E2 137 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 LRRC37A2A6NM11 1700 aa14.49□□□□□ -0.09
SLIRP-211ENST00000557623 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 B4DLN1 442 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 ZBTB43O43298 467 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 CYTH3O43739 400 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 AKR1A1P14550 325 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RPS6KB1P23443 525 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 CALML3P27482 149 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 MRPL12P52815 198 aaKnown RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RCAN1P53805 252 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RPS6P62753 249 aaKnown RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 UBE2Q1Q7Z7E8 422 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 MICU3Q86XE3 530 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 CCDC144CPQ8IYA2 1237 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 FBXL16Q8N461 479 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 SAMD3Q8N6K7 520 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 PIGSQ96S52 555 aa14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RBM28Q9NW13 759 aaKnown RBP14.48□□□□□ -0.09
SLIRP-211ENST00000557623 RARBP10826 455 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 RXRAP19793 462 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 CASTP20810 708 aaKnown RBP14.47□□□□□ -0.09
SLIRP-211ENST00000557623 ALDH5A1P51649 535 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-211ENST00000557623 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 SLC30A10Q6XR72 485 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 Q6ZUG5 572 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 ARRDC4Q8NCT1 418 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 DNERQ8NFT8 737 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 HTATIP2Q9BUP3 242 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 TM6SF1Q9BZW5 370 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 MAP3K20Q9NYL2 800 aaKnown RBP14.47□□□□□ -0.09
SLIRP-211ENST00000557623 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
SLIRP-211ENST00000557623 ZHX1Q9UKY1 873 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-211ENST00000557623 FAM184BQ9ULE4 1060 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 PCDHA1Q9Y5I3 950 aa14.47□□□□□ -0.09
SLIRP-211ENST00000557623 BRCA2P51587 3418 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 CPA1P15085 419 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 SRBD1Q8N5C6 995 aaKnown RBP14.46□□□□□ -0.09
SLIRP-211ENST00000557623 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
SLIRP-211ENST00000557623 PAWRQ96IZ0 340 aaKnown RBP14.46□□□□□ -0.09
SLIRP-211ENST00000557623 ZSWIM6Q9HCJ5 1215 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms