RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 GRK4P32298 578 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-247ENST00000557311 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 RNF208Q9H0X6 261 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 RASSF4Q9H2L5 321 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-247ENST00000557311 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-247ENST00000557311 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 COL4A1P02462 1669 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-247ENST00000557311 SOX1O00570 391 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-247ENST00000557311 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 NPR3P17342 541 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 TNNI2P48788 182 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 CHRNDQ07001 517 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 VGLL4Q14135 290 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 FAM117BQ6P1L5 589 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-247ENST00000557311 SNX29Q8TEQ0 813 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-247ENST00000557311 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 TEPSINQ96N21 525 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 FOXD3Q9UJU5 478 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-247ENST00000557311 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
ATXN3-247ENST00000557311 SCN9AQ15858 1988 aa6.15□□□□□ -1.43
ATXN3-247ENST00000557311 SSC5DA1L4H1 1573 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TNFRSF21O75509 655 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-247ENST00000557311 CSF1RP07333 972 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 ELNP15502 786 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 PTPRAP18433 802 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 CDC27P30260 824 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 BMP8BP34820 402 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TXNDC11Q6PKC3 985 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 XKR5Q6UX68 686 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 DZIP1LQ8IYY4 767 aaKnown RBP6.14□□□□□ -1.43
ATXN3-247ENST00000557311 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TTC9Q92623 222 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ATXN3-247ENST00000557311 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
ATXN3-247ENST00000557311 AOX1Q06278 1338 aa6.14□□□□□ -1.43
ATXN3-247ENST00000557311 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 LINC01387J3KSC0 135 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 SNAP23O00161 211 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 EREGO14944 169 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-247ENST00000557311 POLR3DP05423 398 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-247ENST00000557311 EDN3P14138 238 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 GNAI1P63096 354 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
ATXN3-247ENST00000557311 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 RALBP1Q15311 655 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 SHISA2Q6UWI4 295 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 FMR1NBQ8N0W7 255 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-247ENST00000557311 ASAP3Q8TDY4 903 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 PBX4Q9BYU1 374 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 TMEM39BQ9GZU3 492 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 PPME1Q9Y570 386 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 SNCAIPQ9Y6H5 919 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 TAF1P21675 1872 aa6.13□□□□□ -1.43
ATXN3-247ENST00000557311 SOWAHDA6NJG2 315 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 C9orf172C9J069 976 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms