RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 ABHD10Q9NUJ1 306 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 STAT3P40763 770 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 CCDC174Q6PII3 467 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■■ 94.9
TMEM55B-207ENST00000557041 TMOD2Q9NZR1 351 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 SLIT2O94813 1529 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 SLC37A4O43826 429 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 HSP90B2PQ58FF3 399 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 P2RX5Q93086 422 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 SEPT11Q9NVA2 429 aaKnown RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 CYLC1P35663 651 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 GYS2P54840 703 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 ABCC6O95255 1503 aa17.1■□□□□ 0.33
TMEM55B-207ENST00000557041 ICA1Q05084 483 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 SLC35G1Q2M3R5 365 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 CCDC43Q96MW1 224 aaKnown RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 LRP6O75581 1613 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 RAD17O75943 681 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.336e-14■■■■□ 22.8
TMEM55B-207ENST00000557041 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TNFRSF25Q93038 417 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 UTRNP46939 3433 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 E9PMD0 336 aa17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 TBC1D10BQ4KMP7 808 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-207ENST00000557041 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 H0YIN7 160 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 CXCR5P32302 372 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 MB21D1Q8N884 522 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 DDX12PQ92771 950 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 PARD6BQ9BYG5 372 aa17.08■□□□□ 0.33
TMEM55B-207ENST00000557041 NPHP3-ACAD11A0A0J9YXS1 232 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 CRKP46108 304 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 PPP4CP60510 307 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 GPS2Q13227 327 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 PANX2Q96RD6 677 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 SFI1A8K8P3 1242 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 KRT86O43790 486 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 E2F4Q16254 413 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 SH3GLB2Q9NR46 395 aa17.08■□□□□ 0.32
TMEM55B-207ENST00000557041 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 NDUFA10O95299 355 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 DNM2P50570 870 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 GALNT17Q6IS24 598 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 ADSSL1Q8N142 457 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 EFCAB8A8MWE9 144 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 RHBDL3P58872 404 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 ERVK-24P63145 666 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 AOC3Q16853 763 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 HOMER2Q9NSB8 354 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
TMEM55B-207ENST00000557041 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 RAPGEF1Q13905 1077 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 POTECB2RU33 542 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 BUB1O43683 1085 aa17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 USO1O60763 962 aaKnown RBP17.06■□□□□ 0.32
TMEM55B-207ENST00000557041 ERLIN1O75477 346 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms