RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TRIM9Q9C026 710 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 VPS16Q9H269 839 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 BLOC1S4Q9NUP1 217 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 LIMA1Q9UHB6 759 aaKnown RBP11.39□□□□□ -0.59
TMEM260-211ENST00000556648 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 RHOBTB3O94955 611 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 NDUFB10O96000 172 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 GH2P01242 217 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 FCER1AP12319 257 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 COPB1P53618 953 aaKnown RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ASIC1P78348 528 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 MCM6Q14566 821 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 SYT10Q6XYQ8 523 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 KCNK18Q7Z418 384 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 HAS1Q92839 578 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 CUL5Q93034 780 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 PAXBP1Q9Y5B6 917 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 A0A1W2PRG0 241 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 AKR1B15C9JRZ8 316 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 NRDCO43847 1150 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ORC2Q13416 577 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ECM1Q16610 540 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 TCP11X2Q5H9J9 407 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 TMEM179Q6ZVK1 233 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 DESI2Q9BSY9 194 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 PSTPIP2Q9H939 334 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
TMEM260-211ENST00000556648 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-211ENST00000556648 SOWAHDA6NJG2 315 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 F5H6K3 240 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-211ENST00000556648 PSMD14O00487 310 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 GYPCP04921 128 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 DPEP1P16444 411 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
TMEM260-211ENST00000556648 KLRC3Q07444 240 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 STK4Q13043 487 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 TTI2Q6NXR4 508 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 LRRN4CLQ8ND94 238 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 EEF2KMTQ96G04 330 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 CSRNP1Q96S65 589 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 ARID3AQ99856 593 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
TMEM260-211ENST00000556648 CUEDC2Q9H467 287 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 EXOC1Q9NV70 894 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 DDX25Q9UHL0 483 aaKnown RBP11.37□□□□□ -0.59
TMEM260-211ENST00000556648 PPP2R2CQ9Y2T4 447 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 PCDHA1Q9Y5I3 950 aa11.37□□□□□ -0.59
TMEM260-211ENST00000556648 A0A0U1RQJ8 604 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 MYMKA6NI61 221 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 ARHGAP6O43182 974 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 MFAP3LO75121 409 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 ENTPD3O75355 529 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 KCNA3P22001 575 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 PDE4DQ08499 809 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 NCBP1Q09161 790 aaKnown RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 HSP90AA2PQ14568 343 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 TRIM65Q6PJ69 517 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 ATRIPQ8WXE1 791 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CALML4Q96GE6 196 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 N4BP3O15049 544 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 RRP9O43818 475 aaKnown RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 MYL1P05976 194 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CASP14P31944 242 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 ECE1P42892 770 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 USH1GQ495M9 461 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 FILIP1LQ4L180 1135 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CCDC93Q567U6 631 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 RAD9BQ6WBX8 426 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 KIAA0895Q8NCT3 520 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 KIF18AQ8NI77 898 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 SNX29Q8TEQ0 813 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 TRIM47Q96LD4 638 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 ANO3Q9BYT9 981 aa11.36□□□□□ -0.59
TMEM260-211ENST00000556648 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms