RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
HNRNPC-226ENST00000556628 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
HNRNPC-226ENST00000556628 RNF41Q9H4P4 317 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-226ENST00000556628 XPNPEP3Q9NQH7 507 aa9.07□□□□□ -0.96
HNRNPC-226ENST00000556628 FAM184BQ9ULE4 1060 aa9.07□□□□□ -0.96
HNRNPC-226ENST00000556628 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 ZNF213O14771 459 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 PLA2G6O60733 806 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 TOP1P11387 765 aaKnown RBP9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 PCP11498 1178 aaKnown RBP9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 LRRC41Q15345 812 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 SLC39A5Q6ZMH5 540 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 KCTD1Q719H9 257 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 ZNF589Q86UQ0 364 aaPredicted RBP9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 DCAF4Q8WV16 495 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 GDF15Q99988 308 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 LBHD1Q9BQE6 289 aaPredicted RBP9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 ACAD9Q9H845 621 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 SPC25Q9HBM1 224 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 INCENPQ9NQS7 918 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 HOMER2Q9NSB8 354 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 ZHX1Q9UKY1 873 aaPredicted RBP9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 ATP11BQ9Y2G3 1177 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 RIPK3Q9Y572 518 aa9.06□□□□□ -0.96
HNRNPC-226ENST00000556628 DNAJC25-GNG10A0A024R161 153 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 NMT2O60551 498 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 FGRP09769 529 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 ALAS1P13196 640 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 MAGEA10P43363 369 aaPredicted RBP9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 NT5C2P49902 561 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 RTP1P59025 263 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 HAND2P61296 217 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 CCDC178Q5BJE1 867 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 AKNAD1Q5T1N1 836 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 CCDC174Q6PII3 467 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 CWC27Q6UX04 472 aaKnown RBP9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 TTC13Q8NBP0 860 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 ESR2Q92731 530 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 FERMT2Q96AC1 680 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 TTC14Q96N46 770 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
HNRNPC-226ENST00000556628 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 LAMA4Q16363 1823 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 PGK1P00558 417 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 ZNF865P0CJ78 1059 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 TAL1P17542 331 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 ADCYAP1R1P41586 468 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 PDE4DQ08499 809 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 ACVR2BQ13705 512 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 IMMTQ16891 758 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 MAMDC4Q6UXC1 1216 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 IQCA1Q86XH1 822 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 TDHQ8IZJ6 230 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 TMEM47Q9BQJ4 181 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 GPCPD1Q9NPB8 672 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 PNMA2Q9UL42 364 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
HNRNPC-226ENST00000556628 MKI67P46013 3256 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 ASB14A6NK59 587 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 SNAI1O95863 264 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 ICAM1P05362 532 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 NOVP48745 357 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 COPS2P61201 443 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 CNTN2Q02246 1040 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 ERICH6BQ5W0A0 696 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 ARMCX2Q7L311 632 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 NUP133Q8WUM0 1156 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 DSCC1Q9BVC3 393 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 ZNF536O15090 1300 aa9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-226ENST00000556628 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 SLC16A2P36021 539 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 SNAP25P60880 206 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 TRIM60Q495X7 471 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 TTBK2Q6IQ55 1244 aa9.02□□□□□ -0.97
HNRNPC-226ENST00000556628 BTNL9Q6UXG8 535 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms