RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 FGBP02675 491 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 HSPD1P10809 573 aaKnown RBP20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 CCL23P55773 120 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 HAND2P61296 217 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 MYO9BQ13459 2157 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 DUSP28Q4G0W2 176 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 SLC30A10Q6XR72 485 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 SYMPKQ92797 1274 aaKnown RBP20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 NOC4LQ9BVI4 516 aaKnown RBP20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 WDR11Q9BZH6 1224 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 TRPV6Q9H1D0 765 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 CCDC171Q6TFL3 1326 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 RAD50Q92878 1312 aa20.74■□□□□ 0.91
SDR39U1-219ENST00000556523 B4GALT4O60513 344 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 PDHBP11177 359 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 PCP11498 1178 aaKnown RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 CALML3P27482 149 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 CPT1AP50416 773 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 MFAP1P55081 439 aaKnown RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 NMIQ13287 307 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 BRDTQ58F21 947 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 RNF207Q6ZRF8 634 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 MFSD6Q6ZSS7 791 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 OR6J1Q8NGC5 347 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 GPHNQ9NQX3 736 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 GRIN2DO15399 1336 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 EYSQ5T1H1 3165 aa20.73■□□□□ 0.91
SDR39U1-219ENST00000556523 SUPT20HL2P0C7V6 817 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 PDE4DQ08499 809 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 PPP2R5BQ15173 497 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 AKNAD1Q5T1N1 836 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 OTOP2Q7RTS6 562 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 ZNF589Q86UQ0 364 aaPredicted RBP20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 RPUSD2Q8IZ73 545 aaKnown RBP20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 USP38Q8NB14 1042 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 RILPL2Q969X0 211 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 ALDH8A1Q9H2A2 487 aaPredicted RBP20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 PRDM12Q9H4Q4 367 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 WDR19Q8NEZ3 1342 aa20.72■□□□□ 0.91
SDR39U1-219ENST00000556523 B4DLN1 442 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 MYL3P08590 195 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 MRPL12P52815 198 aaKnown RBP20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 ZNF543Q08ER8 600 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 TMEM63BQ5T3F8 832 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 TTC14Q96N46 770 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 LNPKQ9C0E8 428 aa20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 CXXC1Q9P0U4 656 aaPredicted RBP20.71■□□□□ 0.91
SDR39U1-219ENST00000556523 ZBBXA8MT70 800 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 NKRFO15226 690 aaKnown RBP eCLIP20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 FAM47CQ5HY64 1035 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 TBC1D10CQ8IV04 446 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 CLEC4DQ8WXI8 215 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 PPM1EQ8WY54 764 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 ESR2Q92731 530 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 WNT8AQ9H1J5 351 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 NKX2-4Q9H2Z4 354 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 SLC28A3Q9HAS3 691 aa20.7■□□□□ 0.9
SDR39U1-219ENST00000556523 RPS6P62753 249 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 PURAQ00577 322 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 TJAP1Q5JTD0 557 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 GPATCH4Q5T3I0 446 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 DNERQ8NFT8 737 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 SCFD2Q8WU76 684 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 SCLYQ96I15 445 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 MTG1Q9BT17 334 aaPredicted RBP20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 SLC4A7Q9Y6M7 1214 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 TNKSO95271 1327 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 PRUNE2Q8WUY3 3088 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 GBF1Q92538 1859 aa20.69■□□□□ 0.9
SDR39U1-219ENST00000556523 TTC28Q96AY4 2481 aa20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 RBM47A0AV96 593 aaKnown RBP20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 PFKMP08237 780 aa20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 USH1GQ495M9 461 aa20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 TRMT13Q9NUP7 481 aaKnown RBP20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 LAMA4Q16363 1823 aa20.68■□□□□ 0.9
SDR39U1-219ENST00000556523 SNHG28P0DPA3 235 aa20.67■□□□□ 0.9
SDR39U1-219ENST00000556523 CYP2C9P11712 490 aa20.67■□□□□ 0.9
SDR39U1-219ENST00000556523 IGFBP4P22692 258 aa20.67■□□□□ 0.9
SDR39U1-219ENST00000556523 NEDD4P46934 1319 aa20.67■□□□□ 0.9
SDR39U1-219ENST00000556523 SCN10AQ9Y5Y9 1956 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 ZNF213O14771 459 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 KPNA6O60684 536 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 EDNRBP24530 442 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 NT5C2P49902 561 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 IQCA1Q86XH1 822 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 ZKSCAN3Q9BRR0 538 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 DIAPH3Q9NSV4 1193 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 THEGQ9P2T0 379 aa20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 YBX2Q9Y2T7 364 aaKnown RBP20.66■□□□□ 0.9
SDR39U1-219ENST00000556523 GOLGA8HP0CJ92 632 aa20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 TXNP10599 105 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 SDSP20132 328 aa20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 AAMPQ13685 434 aa20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 TTLL4Q14679 1199 aa20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 PPP2R2DQ66LE6 453 aa20.65■□□□□ 0.9
SDR39U1-219ENST00000556523 DEFB128Q7Z7B8 93 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms