RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 COPB2P35606 906 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 KARSQ15046 597 aaKnown RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 TDRD7Q8NHU6 1098 aaKnown RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 ZNF830Q96NB3 372 aaPredicted RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 ATF7P17544 494 aaPredicted RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 KRT9P35527 623 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 LEKR1Q6ZMV7 388 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 RNF34Q969K3 372 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 COMMD10Q9Y6G5 202 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 A0A1W2PQ27 194 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 A0A1W2PQ64 194 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 A0A1W2PQD8 194 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 HOXD10P28358 340 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 BMS1Q14692 1282 aaKnown RBP16.9■□□□□ 0.3
LRP1-211ENST00000556356 ARMCX5Q6P1M9 558 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 CEP170P1Q96L14 293 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 DNAI1Q9UI46 699 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
LRP1-211ENST00000556356 GRM4Q14833 912 aa16.89■□□□□ 0.3
LRP1-211ENST00000556356 CBX8Q9HC52 389 aa16.89■□□□□ 0.3
LRP1-211ENST00000556356 RNF146Q9NTX7 359 aa16.89■□□□□ 0.3
LRP1-211ENST00000556356 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 AKR1B1P15121 316 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 ERCC3P19447 782 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 CTAGE9A4FU28 777 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 NMT2O60551 498 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 GAP43P17677 238 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 CUL4AQ13619 759 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 STXBP2Q15833 593 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 PPP1R18Q6NYC8 613 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 MB21D2Q8IYB1 491 aaPredicted RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 N4BP1O75113 896 aaKnown RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.89■□□□□ 0.29
LRP1-211ENST00000556356 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 FLT1P17948 1338 aa16.89■□□□□ 0.29
LRP1-211ENST00000556356 PLSCR1O15162 318 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 FAM151AQ8WW52 585 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
LRP1-211ENST00000556356 PAXBP1Q9Y5B6 917 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 DYDC1Q8WWB3 177 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
LRP1-211ENST00000556356 CTAGE15A4D2H0 777 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 CTAGE8P0CG41 777 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 GSTA5Q7RTV2 222 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 CTAGE6Q86UF2 777 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 CTAGE4Q8IX94 777 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 CCDC97Q96F63 343 aaPredicted RBP16.88■□□□□ 0.29
LRP1-211ENST00000556356 PXDNQ92626 1479 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
LRP1-211ENST00000556356 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
LRP1-211ENST00000556356 IQCDQ96DY2 449 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 MAK16Q9BXY0 300 aaKnown RBP16.88■□□□□ 0.29
LRP1-211ENST00000556356 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
LRP1-211ENST00000556356 PABPN1LA6NDY0 278 aaKnown RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 CCDC91Q7Z6B0 441 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 METTL14Q9HCE5 456 aaKnown RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 STK17AQ9UEE5 414 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 PDXDC2PQ6P474 469 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 NSUN6Q8TEA1 469 aaKnown RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 RPS6KC1Q96S38 1066 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 PCDHA6Q9UN73 950 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 PCDHA8Q9Y5H6 950 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 RGL2O15211 777 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 TMEM191BP0C7N4 346 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 CYP26C1Q6V0L0 522 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 NACA2Q9H009 215 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 INO80B-WBP1J3KQ70 363 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 CCDC122Q5T0U0 273 aa16.87■□□□□ 0.29
LRP1-211ENST00000556356 GIMAP8Q8ND71 665 aaPredicted RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 INO80BQ9C086 356 aaPredicted RBP16.87■□□□□ 0.29
LRP1-211ENST00000556356 LZTFL1Q9NQ48 299 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms