RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 OAZ1P54368 228 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-221ENST00000556342 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 OSBP2Q969R2 916 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-221ENST00000556342 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 KATNBL1Q9H079 304 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 SYNPO2Q9UMS6 1093 aa12.78□□□□□ -0.36
SYNE2-221ENST00000556342 C3orf80F5H4A9 247 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
SYNE2-221ENST00000556342 ACRP10323 421 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 NKX3-2P78367 333 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-221ENST00000556342 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
SYNE2-221ENST00000556342 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 APPBP2Q92624 585 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 MKL1Q969V6 931 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.37
SYNE2-221ENST00000556342 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 ZNF287Q9HBT7 754 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-221ENST00000556342 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
SYNE2-221ENST00000556342 CHD7Q9P2D1 2997 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 SMAPO00193 183 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 TNFRSF10AO00220 468 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 GPAA1O43292 621 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-221ENST00000556342 PRDM1O75626 825 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 TTLL1O95922 423 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 CD4P01730 458 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 BEX3Q00994 111 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 ATXN2LQ8WWM7 1075 aaKnown RBP12.76□□□□□ -0.37
SYNE2-221ENST00000556342 PPM1EQ8WY54 764 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 MYH7P12883 1935 aa12.76□□□□□ -0.37
SYNE2-221ENST00000556342 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-221ENST00000556342 ASTN1O14525 1302 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 FDX1P10109 184 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 BMP3P12645 472 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 GNAT2P19087 354 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 CYP2C18P33260 490 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 TDO2P48775 406 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 ADGRE1Q14246 886 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 RAB30Q15771 203 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 CXCL17Q6UXB2 119 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 IL23AQ9NPF7 189 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 A1CFQ9NQ94 594 aaKnown RBP12.75□□□□□ -0.37
SYNE2-221ENST00000556342 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-221ENST00000556342 THEGQ9P2T0 379 aa12.75□□□□□ -0.37
SYNE2-221ENST00000556342 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 TMEM232C9JQI7 657 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 CABYRO75952 493 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 STAT2P52630 851 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 NOL8Q76FK4 1167 aaKnown RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 NEDD1Q8NHV4 660 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 ASB2Q96Q27 587 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
SYNE2-221ENST00000556342 ISY1Q9ULR0 285 aaKnown RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 GNEQ9Y223 722 aaKnown RBP12.74□□□□□ -0.37
SYNE2-221ENST00000556342 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 ZNF536O15090 1300 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 UMODL1Q5DID0 1318 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 MCM3APO60318 1980 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 ASB14A6NK59 587 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 M0R2C6 588 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 FGBP02675 491 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 APPP05067 770 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 FSCN1Q16658 493 aaKnown RBP12.73□□□□□ -0.37
SYNE2-221ENST00000556342 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 AGBL1Q96MI9 1066 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
SYNE2-221ENST00000556342 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms