RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 KIR2DL2P43627 348 aaPredicted RBP5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 CYP4F3Q08477 520 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 SERINC3Q13530 473 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 LAPTM5Q13571 262 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 PRSS53Q2L4Q9 553 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 HSF5Q4G112 596 aaPredicted RBP5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 ZNF385BQ569K4 471 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 SLCO6A1Q86UG4 719 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 IRF2BP1Q8IU81 584 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 CRACR2BQ8N4Y2 399 aaPredicted RBP5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 NKX2-4Q9H2Z4 354 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 RTEL1Q9NZ71 1219 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 CLEC1BQ9P126 229 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 SIRPGQ9P1W8 387 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 TNFRSF10DQ9UBN6 386 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 MSRB2Q9Y3D2 182 aa5.57□□□□□ -1.52
SUPT16H-206ENST00000556309 THBDP07204 575 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 PLS3P13797 630 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 ENDOUP21128 410 aaKnown RBP5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 KCNJ6P48051 423 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 PPP2R2AP63151 447 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 NR0B2Q15466 257 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 TCERG1LQ5VWI1 586 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 NBPF6Q5VWK0 638 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 HLA-DQA1Q5Y7H0 255 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 EEF1DP3Q658K8 133 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 RCSD1Q6JBY9 416 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 LILRA2Q8N149 483 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 SHISA4Q96DD7 197 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 NBPF4Q96M43 638 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 SLC6A17Q9H1V8 727 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 IMPACTQ9P2X3 320 aa5.56□□□□□ -1.52
SUPT16H-206ENST00000556309 AGRPO00253 132 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 DIAPH1O60610 1272 aaKnown RBP5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 SNRPB2P08579 225 aaKnown RBP5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 MSL3P1P0C860 447 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 PRKCAP17252 672 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 RASA3Q14644 834 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 NLRX1Q86UT6 975 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 NUP43Q8NFH3 380 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 DEPDC7Q96QD5 511 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 IRF2BPLQ9H1B7 796 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 EPN3Q9H201 632 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 CYP26B1Q9NR63 512 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 SNTG2Q9NY99 539 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 TAF6LQ9Y6J9 622 aa5.55□□□□□ -1.52
SUPT16H-206ENST00000556309 NPHP3-ACAD11A0A0J9YXS1 232 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQ45 241 aaPredicted RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQC6 194 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 A0A1W2PQY0 241 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 WTIPA6NIX2 430 aaPredicted RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 ARNTLO00327 626 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 TBC1D8O95759 1140 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 PAMP19021 973 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 TACR1P25103 407 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 MVKQ03426 396 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 YOD1Q5VVQ6 348 aaPredicted RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 MBLAC2Q68D91 279 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 GALNT18Q6P9A2 607 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 CYP2R1Q6VVX0 501 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 TMEM145Q8NBT3 493 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 ST13P5Q8NFI4 369 aaPredicted RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 FRS2Q8WU20 508 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 UBXN4Q92575 508 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 COPS5Q92905 334 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 KCNC2Q96PR1 638 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 IER2Q9BTL4 223 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 USP35Q9P2H5 1018 aa5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 TMEFF2Q9UIK5 374 aaPredicted RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 YBX2Q9Y2T7 364 aaKnown RBP5.54□□□□□ -1.52
SUPT16H-206ENST00000556309 PPP1R11O60927 126 aaPredicted RBP5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 BMP7P18075 431 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 HOXC12P31275 282 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 PDE6BP35913 854 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 SSRP1Q08945 709 aaKnown RBP5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 INF2Q27J81 1249 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 ADGRF1Q5T601 910 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 SOGA3Q5TF21 947 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 DENND5AQ6IQ26 1287 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 SPATA9Q9BWV2 254 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 ZSWIM4Q9H7M6 989 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 ARHGEF4Q9NR80 690 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 GULP1Q9UBP9 304 aa5.53□□□□□ -1.52
SUPT16H-206ENST00000556309 KDM2BQ8NHM5 1336 aa5.52□□□□□ -1.53
SUPT16H-206ENST00000556309 BLACEA4D250 179 aa5.52□□□□□ -1.53
SUPT16H-206ENST00000556309 IQCA1LA6NCM1 817 aa5.52□□□□□ -1.53
SUPT16H-206ENST00000556309 PRODHO43272 600 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms