RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PLIN1O60240 522 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 USP5P45974 858 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 GJD3Q8N144 294 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 GCC1Q96CN9 775 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 OPTNQ96CV9 577 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 UTYO14607 1347 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 CENPFP49454 3210 aa11.28□□□□□ -0.6
GTF2A1-204ENST00000556268 CES1P23141 567 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 GYG1P46976 350 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 ECM1Q16610 540 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 CEP135Q66GS9 1140 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 CEP120Q8N960 986 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 BRI3BPQ8WY22 251 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 SPEF2Q9C093 1822 aa11.27□□□□□ -0.61
GTF2A1-204ENST00000556268 C9orf172C9J069 976 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 TNFRSF21O75509 655 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.612e-20■■■■□ 25.4
GTF2A1-204ENST00000556268 ACPPP15309 386 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 ADAMTSL4Q6UY14 1074 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 TMEM39BQ9GZU3 492 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 SALL4Q9UJQ4 1053 aa11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-204ENST00000556268 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 CRKP46108 304 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 GTF2A2P52657 109 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 EHHADHQ08426 723 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 TAF7LQ5H9L4 462 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 APOBEC3HQ6NTF7 200 aaKnown RBP11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 ZFYVE28Q9HCC9 887 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 MROH5Q6ZUA9 1318 aa11.25□□□□□ -0.61
GTF2A1-204ENST00000556268 BRCA2P51587 3418 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 PHACTR2O75167 634 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 FURINP09958 794 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 VGLL4Q14135 290 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 DOC2BQ14184 412 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 ZDHHC15Q96MV8 337 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 SUGT1Q9Y2Z0 365 aa11.24□□□□□ -0.61
GTF2A1-204ENST00000556268 LAMB1P07942 1786 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 CCL15-CCL14A0A0B4J2E2 113 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 EREGO14944 169 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 TLR2O60603 784 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 PDE8BO95263 885 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 TNNI2P48788 182 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 CCL15Q16663 113 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 LRRC24Q50LG9 513 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 NBPF11Q86T75 865 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 ERO1BQ86YB8 467 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 CACTIN-AS1Q8N1I8 211 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
GTF2A1-204ENST00000556268 ADAM23O75077 832 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 FGFR2P21802 821 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 NRG1Q02297 640 aaPredicted RBP11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 ANKRD44Q8N8A2 993 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 PMEPA1Q969W9 287 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 PPME1Q9Y570 386 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 CSADQ9Y600 493 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
GTF2A1-204ENST00000556268 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 KIF16BQ96L93 1317 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 BTBD19C9JJ37 291 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 DLL1O00548 723 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms