RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 WASF1Q92558 559 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-210ENST00000556166 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 CALML3P27482 149 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 ADCY7P51828 1080 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 KCTD2Q14681 263 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 KIF22Q14807 665 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 KRT40Q6A162 431 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
GABRB3-210ENST00000556166 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 M0R2N6 131 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 IGHA2P01877 340 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
GABRB3-210ENST00000556166 FLT3LGP49771 235 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 NLRP5P59047 1200 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
GABRB3-210ENST00000556166 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
GABRB3-210ENST00000556166 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-210ENST00000556166 PFASO15067 1338 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 HOXC6P09630 235 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 CYP2B6P20813 491 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 MRPL12P52815 198 aaKnown RBP13.17□□□□□ -0.3
GABRB3-210ENST00000556166 CCL14Q16627 93 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 RASGRP4Q8TDF6 673 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 CUL5Q93034 780 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
GABRB3-210ENST00000556166 EDIL3O43854 480 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 BECN1Q14457 450 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
GABRB3-210ENST00000556166 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
GABRB3-210ENST00000556166 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 MAF1Q9H063 256 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
GABRB3-210ENST00000556166 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 TRIM17Q9Y577 477 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
GABRB3-210ENST00000556166 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 GNRH1P01148 92 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 MMP1P03956 469 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
GABRB3-210ENST00000556166 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
GABRB3-210ENST00000556166 LARP1BQ659C4 914 aaKnown RBP13.15□□□□□ -0.3
GABRB3-210ENST00000556166 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 SOCS4Q8WXH5 440 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 SYT1P21579 422 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 HOXD10P28358 340 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 GNA11P29992 359 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 RGS2P41220 211 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 NR5A1Q13285 461 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 IRF5Q13568 498 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
GABRB3-210ENST00000556166 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
GABRB3-210ENST00000556166 DIS3Q9Y2L1 958 aaKnown RBP13.15□□□□□ -0.3
GABRB3-210ENST00000556166 PLXNB2O15031 1838 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 RPTORQ8N122 1335 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 FAM205CA6NFA0 338 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 HSP90AA1P07900 732 aaKnown RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 ELNP15502 786 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 XBP1P17861 261 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 ALDH5A1P51649 535 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-210ENST00000556166 UBXN2AP68543 259 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 TRIM29Q14134 588 aa13.14□□□□□ -0.31
GABRB3-210ENST00000556166 ARHGEF6Q15052 776 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms