RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 KIAA1211Q6ZU35 1233 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 MAFAQ8NHW3 353 aaPredicted RBP20.83■□□□□ 0.93
NPC2-208ENST00000556009 CLEC4DQ8WXI8 215 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 RILPL2Q969X0 211 aa20.83■□□□□ 0.93
NPC2-208ENST00000556009 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
NPC2-208ENST00000556009 MYO9BQ13459 2157 aa20.82■□□□□ 0.92
NPC2-208ENST00000556009 RBM47A0AV96 593 aaKnown RBP20.82■□□□□ 0.92
NPC2-208ENST00000556009 NFIBO00712 420 aa20.82■□□□□ 0.92
NPC2-208ENST00000556009 DNAJB2P25686 324 aa20.82■□□□□ 0.92
NPC2-208ENST00000556009 PSRC1Q6PGN9 363 aaPredicted RBP20.82■□□□□ 0.92
NPC2-208ENST00000556009 WDR19Q8NEZ3 1342 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 CYP2C18P33260 490 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 TMEM63BQ5T3F8 832 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 ZNF365Q70YC5 407 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 TBC1D10CQ8IV04 446 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 ESR2Q92731 530 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 PPP1R12CQ9BZL4 782 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 MAF1Q9H063 256 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 IL23AQ9NPF7 189 aa20.81■□□□□ 0.92
NPC2-208ENST00000556009 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
NPC2-208ENST00000556009 MYH6P13533 1939 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 FOSL2P15408 326 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
NPC2-208ENST00000556009 RNF207Q6ZRF8 634 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 CHD1LQ86WJ1 897 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 TIFAQ96CG3 184 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 WDR11Q9BZH6 1224 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 HIPK3Q9H422 1215 aa20.8■□□□□ 0.92
NPC2-208ENST00000556009 SCN5AQ14524 2016 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 PTPDC1A2A3K4 754 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 ZNF213O14771 459 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 NUCB1Q02818 461 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 GRIN2CQ14957 1233 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 CCDC178Q5BJE1 867 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 DNERQ8NFT8 737 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 HERVK_113Q902F9 699 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 ZNF576Q9H609 170 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
NPC2-208ENST00000556009 CHD9Q3L8U1 2897 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 ACRP10323 421 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 EDNRBP24530 442 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 RPS6P62753 249 aaKnown RBP20.78■□□□□ 0.92
NPC2-208ENST00000556009 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 SLC30A10Q6XR72 485 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 ANKS1AQ92625 1134 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 MPHOSPH6Q99547 160 aaKnown RBP20.78■□□□□ 0.92
NPC2-208ENST00000556009 NOC4LQ9BVI4 516 aaKnown RBP20.78■□□□□ 0.92
NPC2-208ENST00000556009 TRPV6Q9H1D0 765 aa20.78■□□□□ 0.92
NPC2-208ENST00000556009 B4DLN1 442 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.92
NPC2-208ENST00000556009 B4GALT4O60513 344 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 IGHDP01880 384 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 FGBP02675 491 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 CALML3P27482 149 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 CPT1AP50416 773 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 MRPL12P52815 198 aaKnown RBP20.77■□□□□ 0.92
NPC2-208ENST00000556009 PSMC6P62333 389 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 PBX4Q9BYU1 374 aa20.77■□□□□ 0.92
NPC2-208ENST00000556009 NEDD4P46934 1319 aa20.77■□□□□ 0.91
NPC2-208ENST00000556009 GRXCR1A8MXD5 290 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 HIP1O00291 1037 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
NPC2-208ENST00000556009 SUPT20HL2P0C7V6 817 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 PDE4DQ08499 809 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 IQCA1Q86XH1 822 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
NPC2-208ENST00000556009 MTIF3Q9H2K0 278 aaKnown RBP20.76■□□□□ 0.91
NPC2-208ENST00000556009 UMODL1Q5DID0 1318 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 SCN10AQ9Y5Y9 1956 aa20.76■□□□□ 0.91
NPC2-208ENST00000556009 TTC28Q96AY4 2481 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 KPNA6O60684 536 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 PBX2P40425 430 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 PURAQ00577 322 aaKnown RBP20.75■□□□□ 0.91
NPC2-208ENST00000556009 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
NPC2-208ENST00000556009 CWC27Q6UX04 472 aaKnown RBP20.75■□□□□ 0.91
NPC2-208ENST00000556009 RPUSD2Q8IZ73 545 aaKnown RBP20.75■□□□□ 0.91
NPC2-208ENST00000556009 SCFD2Q8WU76 684 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 ZKSCAN3Q9BRR0 538 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 DSCC1Q9BVC3 393 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 DIAPH3Q9NSV4 1193 aa20.75■□□□□ 0.91
NPC2-208ENST00000556009 A6NJR5 290 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 KDM4AO75164 1064 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 CCL23P55773 120 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 RAB30Q15771 203 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 PNMA1Q8ND90 353 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 OR6J1Q8NGC5 347 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 MTG1Q9BT17 334 aaPredicted RBP20.74■□□□□ 0.91
NPC2-208ENST00000556009 TANC1Q9C0D5 1861 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 WNT8AQ9H1J5 351 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
NPC2-208ENST00000556009 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
NPC2-208ENST00000556009 KIAA1217Q5T5P2 1943 aa20.74■□□□□ 0.91
NPC2-208ENST00000556009 PPP2R5BQ15173 497 aa20.73■□□□□ 0.91
NPC2-208ENST00000556009 USP38Q8NB14 1042 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms