RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 GPRASP2Q96D09 838 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 FGD4Q96M96 766 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 GBP3Q9H0R5 595 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 RXFP1Q9HBX9 757 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 SLC12A7Q9Y666 1083 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 ASGR2P07307 311 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 MC3RP41968 323 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 ADAT2Q7Z6V5 191 aaKnown RBP7□□□□□ -1.29
SCFD1-217ENST00000555953 ADGRG2Q8IZP9 1017 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 RASGRP4Q8TDF6 673 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 FNIP1Q8TF40 1166 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 SPATA32Q96LK8 384 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 RNF38Q9H0F5 515 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 BCAS3Q9H6U6 928 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 CGGBP1Q9UFW8 167 aaPredicted RBP7□□□□□ -1.29
SCFD1-217ENST00000555953 SUSD2Q9UGT4 822 aa7□□□□□ -1.29
SCFD1-217ENST00000555953 DBR1Q9UK59 544 aaKnown RBP7□□□□□ -1.29
SCFD1-217ENST00000555953 A0A1B0GTL3 188 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 ZBTB7CA1YPR0 619 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 SLURP1P55000 103 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 HTRA3P83110 453 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 FRMD5Q7Z6J6 570 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 OR6P1Q8NGX9 317 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 TEPSINQ96N21 525 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 BACE2Q9Y5Z0 518 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 PMF1-BGLAPU3KQ54 211 aa6.99□□□□□ -1.29
SCFD1-217ENST00000555953 PPP1R11O60927 126 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-217ENST00000555953 PPM1BO75688 479 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 SEPHS1P49903 392 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 ARHGEF39Q8N4T4 335 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 LZTR1Q8N653 840 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 ALG3Q92685 438 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 SHDQ96IW2 340 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 FAN1Q9Y2M0 1017 aa6.98□□□□□ -1.29
SCFD1-217ENST00000555953 C2orf71A6NGG8 1288 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 CELA3BP08861 270 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 NCAM1P13591 858 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 PMLP29590 882 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 KCNC1P48547 511 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 AMPD2Q01433 879 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 DLX2Q07687 328 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-217ENST00000555953 LIPIQ6XZB0 460 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 SAPCD2Q86UD0 394 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 ZNF513Q8N8E2 541 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-217ENST00000555953 ZNF526Q8TF50 670 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-217ENST00000555953 TSPAN17Q96FV3 270 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
SCFD1-217ENST00000555953 MTA3Q9BTC8 594 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 GULP1Q9UBP9 304 aa6.97□□□□□ -1.29
SCFD1-217ENST00000555953 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-217ENST00000555953 GJA8P48165 433 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-217ENST00000555953 HDLBPQ00341 1268 aaKnown RBP6.96□□□□□ -1.3
SCFD1-217ENST00000555953 GRB10Q13322 594 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 PPP2R5EQ16537 467 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 C9orf131Q5VYM1 1079 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 B3GNT8Q7Z7M8 397 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 CABP7Q86V35 215 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 APEX2Q9UBZ4 518 aa6.96□□□□□ -1.3
SCFD1-217ENST00000555953 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-217ENST00000555953 KIAA1211LQ6NV74 962 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 PRRT2Q7Z6L0 340 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-217ENST00000555953 FAM169BQ8N8A8 192 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 NETO2Q8NC67 525 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 SUGT1Q9Y2Z0 365 aa6.95□□□□□ -1.3
SCFD1-217ENST00000555953 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 PAMP19021 973 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 CASP7P55210 303 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 NFKB2Q00653 900 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 TRIM26Q12899 539 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-217ENST00000555953 RTP5Q14D33 572 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 PEX11GQ96HA9 241 aa6.94□□□□□ -1.3
SCFD1-217ENST00000555953 C7orf72A4D263 438 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 ANKRD34BA5PLL1 514 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 NT5DC1Q5TFE4 455 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 MBLAC2Q68D91 279 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 WWC2Q6AWC2 1192 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 SMARCC2Q8TAQ2 1214 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 CPLX3Q8WVH0 158 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 NUDT5Q9UKK9 219 aa6.93□□□□□ -1.3
SCFD1-217ENST00000555953 SLC9A5Q14940 896 aa6.92□□□□□ -1.3
SCFD1-217ENST00000555953 CPA5Q8WXQ8 436 aa6.92□□□□□ -1.3
SCFD1-217ENST00000555953 CLEC1BQ9P126 229 aa6.92□□□□□ -1.3
SCFD1-217ENST00000555953 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
SCFD1-217ENST00000555953 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
SCFD1-217ENST00000555953 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
SCFD1-217ENST00000555953 NPHS1O60500 1241 aa6.91□□□□□ -1.3
SCFD1-217ENST00000555953 KCNH1O95259 989 aa6.91□□□□□ -1.3
SCFD1-217ENST00000555953 PLS3P13797 630 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms