RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-222ENST00000555907 COL25A1Q9BXS0 654 aaPredicted RBP13.04□□□□□ -0.32
RAD51B-222ENST00000555907 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 MTMR10Q9NXD2 777 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 STXBP5LQ9Y2K9 1186 aa13.04□□□□□ -0.32
RAD51B-222ENST00000555907 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
RAD51B-222ENST00000555907 NUCB2P80303 420 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 TRIB2Q92519 343 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 PORCNQ9H237 461 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 BARHL2Q9NY43 387 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
RAD51B-222ENST00000555907 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 RLFQ13129 1914 aa13.03□□□□□ -0.32
RAD51B-222ENST00000555907 VWA5AO00534 786 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 ATP2A1O14983 1001 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 STX6O43752 255 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 FLOT1O75955 427 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 XBP1P17861 261 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 MAPK4P31152 587 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 OAZ1P54368 228 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
RAD51B-222ENST00000555907 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
RAD51B-222ENST00000555907 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 DTNBO60941 627 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 ZBED4O75132 1171 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 CNMDO75829 334 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 BRD1O95696 1058 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 CCNA1P78396 465 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 CDC37Q16543 378 aaPredicted RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 PLEKHH3Q7Z736 793 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 REPS2Q8NFH8 660 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 MAF1Q9H063 256 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 PFASO15067 1338 aa13.01□□□□□ -0.33
RAD51B-222ENST00000555907 COL11A1P12107 1806 aaPredicted RBP13.01□□□□□ -0.33
RAD51B-222ENST00000555907 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
RAD51B-222ENST00000555907 ZNF536O15090 1300 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 STXBP3O00186 592 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
RAD51B-222ENST00000555907 PPFIA3O75145 1194 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 ICAM1P05362 532 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 CALML3P27482 149 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 TRIM29Q14134 588 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 LRIT3Q3SXY7 679 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 WDR78Q5VTH9 848 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 KRT40Q6A162 431 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 PHF6Q8IWS0 365 aaKnown RBP eCLIP13□□□□□ -0.33
RAD51B-222ENST00000555907 CCDC148Q8NFR7 591 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 SOCS4Q8WXH5 440 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 AIFM3Q96NN9 605 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 PHF20Q9BVI0 1012 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 ZMYND12Q9H0C1 365 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 BTBD7Q9P203 1132 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 MTMR6Q9Y217 621 aa13□□□□□ -0.33
RAD51B-222ENST00000555907 LAMA3Q16787 3333 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 H3BQV1 296 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 MMP1P03956 469 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 ZSCAN22P10073 491 aaPredicted RBP12.99□□□□□ -0.33
RAD51B-222ENST00000555907 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
RAD51B-222ENST00000555907 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
RAD51B-222ENST00000555907 RGS2P41220 211 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 LRRC26Q2I0M4 334 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 MORN1Q5T089 497 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 MYH6P13533 1939 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
RAD51B-222ENST00000555907 U2AF2P26368 475 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAD51B-222ENST00000555907 GNA11P29992 359 aa12.98□□□□□ -0.33
RAD51B-222ENST00000555907 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAD51B-222ENST00000555907 NPY5RQ15761 445 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms