RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 ANKRD33Q7Z3H0 272 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 TLK2Q86UE8 772 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 BADQ92934 168 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 STARD7Q9NQZ5 370 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 TBX21Q9UL17 535 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 VCANP13611 3396 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 ASB14A6NK59 587 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 KIAA0355O15063 1070 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 SGSM2O43147 1006 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 CLTBP09497 229 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 CDK7P50613 346 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 RPS6P62753 249 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 CDC37Q16543 378 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 COL20A1Q9P218 1284 aa10.91□□□□□ -0.66
VIPAS39-207ENST00000555854 OPLAHO14841 1288 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 CALML3P27482 149 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 ANTXR2P58335 489 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 TNFAIP2Q03169 654 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 SHHQ15465 462 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 QRICH1Q2TAL8 776 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 USH1GQ495M9 461 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 IQCA1Q86XH1 822 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 ADGRF4Q8IZF3 695 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 TBC1D5Q92609 795 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 VTA1Q9NP79 307 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
VIPAS39-207ENST00000555854 ELP1O95163 1332 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 RBM47A0AV96 593 aaKnown RBP10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 ARIH2O95376 493 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 ASPRV1Q53RT3 343 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 GPR153Q6NV75 609 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 CXCL17Q6UXB2 119 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 RNF207Q6ZRF8 634 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 FAM126BQ8IXS8 530 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 GLT1D1Q96MS3 346 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 TOX2Q96NM4 488 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 LBHD1Q9BQE6 289 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 KRT23Q9C075 422 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 JMJD4Q9H9V9 463 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 PRKAG2Q9UGJ0 569 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 MAD2L2Q9UI95 211 aa10.89□□□□□ -0.67
VIPAS39-207ENST00000555854 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 MYH6P13533 1939 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 A0A0U1RQG5 324 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 ARVCFO00192 962 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 CD4P01730 458 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 FSCN1Q16658 493 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 CCDC178Q5BJE1 867 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 MB21D2Q8IYB1 491 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 PCSK9Q8NBP7 692 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 SYTL5Q8TDW5 730 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 COPS5Q92905 334 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 UBAC1Q9BSL1 405 aa10.88□□□□□ -0.67
VIPAS39-207ENST00000555854 ABCB11O95342 1321 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 LOC102724159A0A0B4J2E5 919 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 E7EWF7 191 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 DYNC1LI2O43237 492 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 CYTH3O43739 400 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 PSMC6P62333 389 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 GHRHRQ02643 423 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 GRM4Q14833 912 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 PWP2Q15269 919 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 KIAA1211Q6ZU35 1233 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 CHST3Q7LGC8 479 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 DEFB123Q8N688 67 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 MAP4K1Q92918 833 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 GUCD1Q96NT3 240 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 LSG1Q9H089 658 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 GPHNQ9NQX3 736 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 TMEM39AQ9NV64 488 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-207ENST00000555854 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 RAG1P15918 1043 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 TROAPQ12815 778 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 IQSEC1Q6DN90 963 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 FAM109BQ6ICB4 259 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 NOL8Q76FK4 1167 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
VIPAS39-207ENST00000555854 DNERQ8NFT8 737 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms