RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 JAKMIP2Q96AA8 810 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 DYNLL2Q96FJ2 89 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 PURBQ96QR8 312 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 STK17AQ9UEE5 414 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 ABL1P00519 1130 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 RHOXF2BP0C7M4 288 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 NOVP48745 357 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 CASP8Q14790 479 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 C16orf86Q6ZW13 317 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 CNOT6LQ96LI5 555 aaKnown RBP18.06■□□□□ 0.48
TUBB3-209ENST00000555609 RHOXF2Q9BQY4 288 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 TSPYL1Q9H0U9 437 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
TUBB3-209ENST00000555609 ZCCHC17Q9NP64 241 aaKnown RBP18.06■□□□□ 0.48
TUBB3-209ENST00000555609 SMCO2A6NFE2 343 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 PP2D1A8MPX8 630 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 B4DLN1 442 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 H3BQF6 201 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 PES1O00541 588 aaKnown RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 ONECUT3O60422 494 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 MTIF2P46199 727 aaKnown RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 ST5P78524 1137 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 GRAPQ13588 217 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 MCM6Q14566 821 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 GOLGA5Q8TBA6 731 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 NOC4LQ9BVI4 516 aaKnown RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 NHEJ1Q9H9Q4 299 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 SEC63Q9UGP8 760 aaKnown RBP18.05■□□□□ 0.48
TUBB3-209ENST00000555609 ASIC1P78348 528 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 ANKRD40Q6AI12 368 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 CENPPQ6IPU0 288 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 SV2BQ7L1I2 683 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 TXNRD3Q86VQ6 643 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 EDEM3Q9BZQ6 932 aa18.05■□□□□ 0.48
TUBB3-209ENST00000555609 NAV1Q8NEY1 1877 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 CCNT1O60563 726 aaKnown RBP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 USO1O60763 962 aaKnown RBP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 PRLRP16471 622 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 AARSP49588 968 aaKnown RBP eCLIP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 VAV2P52735 878 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 ITIH3Q06033 890 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 CCDC84Q86UT8 332 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 NOA1Q8NC60 698 aaKnown RBP18.04■□□□□ 0.48
TUBB3-209ENST00000555609 TGFBRAP1Q8WUH2 860 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 EYA3Q99504 573 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 RAB34Q9BZG1 259 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
TUBB3-209ENST00000555609 GPR75-ASB3A0A0A6YYF3 556 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 RPS6KA5O75582 802 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 CDK8P49336 464 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 KIF5AQ12840 1032 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 PSMD2Q13200 908 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 PDIA5Q14554 519 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 SPA17Q15506 151 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 MIIPQ5JXC2 388 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 CCDC70Q6NSX1 233 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 UNC13DQ70J99 1090 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-209ENST00000555609 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 TULP2O00295 520 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 IVLP07476 585 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 STK4Q13043 487 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 NCAPH2Q6IBW4 605 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 ZNF572Q7Z3I7 529 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-209ENST00000555609 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
TUBB3-209ENST00000555609 TRIM58Q8NG06 486 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 RTFDC1Q9BY42 306 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-209ENST00000555609 PLAGL2Q9UPG8 496 aa18.03■□□□□ 0.48
TUBB3-209ENST00000555609 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
TUBB3-209ENST00000555609 BAZ2BQ9UIF8 2168 aaKnown RBP18.02■□□□□ 0.48
TUBB3-209ENST00000555609 LCA5LO95447 670 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 ATP1A1P05023 1023 aaKnown RBP18.02■□□□□ 0.48
TUBB3-209ENST00000555609 ACTN2P35609 894 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 LRRC63Q05C16 580 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 SEPT2Q15019 361 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 KRT27Q7Z3Y8 459 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 NEK11Q8NG66 645 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 LRRC15Q8TF66 581 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 MTMR9Q96QG7 549 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
TUBB3-209ENST00000555609 SLC26A4O43511 780 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 ZSCAN26Q16670 478 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 VWA3BQ502W6 1294 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 PPP1R18Q6NYC8 613 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 REXO1Q8N1G1 1221 aaKnown RBP18.01■□□□□ 0.47
TUBB3-209ENST00000555609 SECISBP2LQ93073 1101 aaKnown RBP18.01■□□□□ 0.47
TUBB3-209ENST00000555609 CCDC42Q96M95 316 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 PCMTD1Q96MG8 357 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms