RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 STAT3P40763 770 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 PLS1Q14651 629 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 CCDC174Q6PII3 467 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 FAM177A1Q8N128 213 aaPredicted RBP16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 MAF1Q9H063 256 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 RAVER2Q9HCJ3 691 aaKnown RBP16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 DNAH12Q6ZR08 3092 aa16.46■□□□□ 0.23
NME1-NME2-203ENST00000555572 ABCB11O95342 1321 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 SCG2P13521 617 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 CYP2B6P20813 491 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 SNAP25P60880 206 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 MORN1Q5T089 497 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 FBXO40Q9UH90 709 aa16.45■□□□□ 0.22
NME1-NME2-203ENST00000555572 MAPK4P31152 587 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 TEX2Q8IWB9 1127 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 PORCNQ9H237 461 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 MROH8Q9H579 483 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 SH3GLB2Q9NR46 395 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
NME1-NME2-203ENST00000555572 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 COL6A1P12109 1028 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 XBP1P17861 261 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 CACNB2Q08289 660 aaPredicted RBP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 PKN1Q16512 942 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 LHX8Q68G74 356 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 GPR153Q6NV75 609 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 C7orf61Q8IZ16 206 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 C11orf49Q9H6J7 331 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 BARHL2Q9NY43 387 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 CUL9Q8IWT3 2517 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 PFASO15067 1338 aa16.43■□□□□ 0.22
NME1-NME2-203ENST00000555572 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 JAK2O60674 1132 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 ALAS1P13196 640 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 USH1GQ495M9 461 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 SAMD3Q8N6K7 520 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 FAM184AQ8NB25 1140 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 ZMYND8Q9ULU4 1186 aaPredicted RBP16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
NME1-NME2-203ENST00000555572 ESYT2A0FGR8 921 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 STXBP3O00186 592 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 FDPSP14324 419 aaKnown RBP16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 ERCC3P19447 782 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 NAPAP54920 295 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 MCF2L2Q86YR7 1114 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
NME1-NME2-203ENST00000555572 ZNF236Q9UL36 1845 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 STRNO43815 780 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 GJB2P29033 226 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 RGS2P41220 211 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 CCL14Q16627 93 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 ABRAQ8N0Z2 381 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
NME1-NME2-203ENST00000555572 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms