RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TXNRD2Q9NNW7 524 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
SRP54-208ENST00000555557 TLL2Q9Y6L7 1015 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 ELP1O95163 1332 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
SRP54-208ENST00000555557 TRAK2O60296 914 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 YEATS4O95619 227 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 OSBPP22059 807 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 ME1P48163 572 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.551e-8■■□□□ 12.5
SRP54-208ENST00000555557 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 TEX13BQ9BXU2 312 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 ANO3Q9BYT9 981 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 RNF146Q9NTX7 359 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 PCDHA7Q9UN72 937 aa11.64□□□□□ -0.55
SRP54-208ENST00000555557 TRPM7Q96QT4 1865 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 PIK3CDO00329 1044 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 CCNT1O60563 726 aaKnown RBP11.63□□□□□ -0.55
SRP54-208ENST00000555557 CNMDO75829 334 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 OAZ1P54368 228 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 HTRA3P83110 453 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 GRM1Q13255 1194 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 Q3C1V9 767 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 NEK8Q86SG6 692 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 CLIC6Q96NY7 704 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 R3HDMLQ9H3Y0 253 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 RBPJLQ9UBG7 517 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
SRP54-208ENST00000555557 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
SRP54-208ENST00000555557 ATP2A1O14983 1001 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 UBE2HP62256 183 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 UBXN2AP68543 259 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 GRIN1Q05586 938 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 PTGDRQ13258 359 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
SRP54-208ENST00000555557 COL20A1Q9P218 1284 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 PARP14Q460N5 1801 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 TDP2O95551 362 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 SLC10A3P09131 477 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 HSD17B4P51659 736 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 RPS6P62753 249 aaKnown RBP11.62□□□□□ -0.55
SRP54-208ENST00000555557 AP3B2Q13367 1082 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 SLC30A10Q6XR72 485 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
SRP54-208ENST00000555557 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 MCF2L2Q86YR7 1114 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 MB21D1Q8N884 522 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 SMCR8Q8TEV9 937 aaPredicted RBP11.62□□□□□ -0.55
SRP54-208ENST00000555557 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
SRP54-208ENST00000555557 ZIC5Q96T25 663 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 SPATC1LQ9H0A9 340 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 TMEM60Q9H2L4 133 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
SRP54-208ENST00000555557 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 PPP6R2O75170 966 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 FOSP01100 380 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 FSTL1Q12841 308 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 SPECC1Q5M775 1068 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 RNF207Q6ZRF8 634 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 NCAPG2Q86XI2 1143 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 SYTL5Q8TDW5 730 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 PNMA2Q9UL42 364 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 CEP131Q9UPN4 1083 aa11.61□□□□□ -0.55
SRP54-208ENST00000555557 COL11A1P12107 1806 aaPredicted RBP11.61□□□□□ -0.55
SRP54-208ENST00000555557 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
SRP54-208ENST00000555557 SLC37A4O43826 429 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 PTMSP20962 102 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 ATP2C1P98194 919 aaPredicted RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 ADALQ6DHV7 355 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 RIOX2Q8IUF8 465 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 ANKRD13CQ8N6S4 541 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 TAAR1Q96RJ0 339 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 MOV10L1Q9BXT6 1211 aaKnown RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 ACAD9Q9H845 621 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 LIG1P18858 919 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 ERCC3P19447 782 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 PTPREP23469 700 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 SREBF1P36956 1147 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 IL17AQ16552 155 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 POTEDQ86YR6 584 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 CCAR1Q8IX12 1150 aaKnown RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 KRI1Q8N9T8 703 aaKnown RBP11.6□□□□□ -0.55
SRP54-208ENST00000555557 CRYGNQ8WXF5 182 aa11.6□□□□□ -0.55
SRP54-208ENST00000555557 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms