RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 LGALS16A8MUM7 142 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 AFMP43652 599 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 HERVK_113P62684 666 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 GRM4Q14833 912 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 BLIDQ8IZY5 108 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 CAVIN3Q969G5 261 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 TAF1P21675 1872 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 SPATA31A6Q5VVP1 1343 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 hCG_1642624A0A1W2PR95 340 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 MYL1P05976 194 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 CYP2D6P10635 497 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 MAP2K2P36507 400 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 DNM2P50570 870 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 TFAP4Q01664 338 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 UBXN1Q04323 297 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 GRAPQ13588 217 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 E2F4Q16254 413 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 KIAA1328Q86T90 577 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 CCDC155Q8N6L0 562 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 DAGLBQ8NCG7 672 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 THAP9Q9H5L6 903 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.5
MTHFD1-210ENST00000555252 KIAA0754O94854 1291 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 MNAT1P51948 309 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 GNGT1P63211 74 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 DRP2Q13474 957 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 GLE1Q53GS7 698 aaKnown RBP11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 FIGNQ5HY92 759 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 PNMA1Q8ND90 353 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 TRIM58Q8NG06 486 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 NELFBQ8WX92 580 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 KAT2BQ92831 832 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 NGLY1Q96IV0 654 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 RUFY1Q96T51 708 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 CHP1Q99653 195 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 VPS16Q9H269 839 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 CXorf56Q9H5V9 222 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.51
MTHFD1-210ENST00000555252 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 XDHP47989 1333 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 TTC26A0AVF1 554 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 RNF225M0QZC1 329 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 LAD1O00515 517 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 NMT2O60551 498 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 LIG3P49916 1009 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
MTHFD1-210ENST00000555252 A0A1W2PQJ5 194 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 HSF2BPO75031 334 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 TCP1P17987 556 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 ZNF444Q8N0Y2 327 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 RIN2Q8WYP3 895 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 WNT7AO00755 349 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 ENC1O14682 589 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 IDEP14735 1019 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 MCM7P33993 719 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 RFC4P35249 363 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 PPP1R2P41236 205 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 VAV2P52735 878 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 KCNQ4P56696 695 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 ZBED6P86452 979 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 KCNB1Q14721 858 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 C4orf32Q8N8J7 132 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 C3orf20Q8ND61 904 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 DONSONQ9NYP3 566 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
MTHFD1-210ENST00000555252 BTAF1O14981 1849 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TMCO5BA8MYB1 307 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 ANKRD65E5RJM6 399 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 C21orf2O43822 256 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TACC1O75410 805 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms