RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 UBXN2AP68543 259 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 TEX13BQ9BXU2 312 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 FOXP1Q9H334 677 aaPredicted RBP12.34□□□□□ -0.43
TDP1-211ENST00000555178 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 RIC8AQ9NPQ8 531 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 ASTN1O14525 1302 aa12.34□□□□□ -0.43
TDP1-211ENST00000555178 DOCK5Q9H7D0 1870 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 PDIA4P13667 645 aaKnown RBP12.33□□□□□ -0.44
TDP1-211ENST00000555178 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 ADCY7P51828 1080 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 PABPC4Q13310 644 aaKnown RBP eCLIP12.33□□□□□ -0.44
TDP1-211ENST00000555178 PIK3AP1Q6ZUJ8 805 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
TDP1-211ENST00000555178 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 BCRP11274 1271 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 BRAPQ7Z569 592 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
TDP1-211ENST00000555178 TSKSQ9UJT2 592 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 MRVI1Q9Y6F6 885 aa12.33□□□□□ -0.44
TDP1-211ENST00000555178 ABCB11O95342 1321 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 TRPA1O75762 1119 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 SREBF2Q12772 1141 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
TDP1-211ENST00000555178 DAGLBQ8NCG7 672 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
TDP1-211ENST00000555178 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
TDP1-211ENST00000555178 hCG_1984214I3L0E3 225 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 TLR2O60603 784 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 PGK2P07205 417 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 CALML3P27482 149 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 OAZ1P54368 228 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 INHBEP58166 350 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 RPS6P62753 249 aaKnown RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 KRT85P78386 507 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 ZNF713Q8N859 430 aaPredicted RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 IL31RAQ8NI17 732 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 TAAR1Q96RJ0 339 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 MRPL11Q9Y3B7 192 aaKnown RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 HSD17B4P51659 736 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 INF2Q27J81 1249 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 MB21D1Q8N884 522 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
TDP1-211ENST00000555178 CUL5Q93034 780 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 LRRC37A2A6NM11 1700 aa12.31□□□□□ -0.44
TDP1-211ENST00000555178 BRCA2P51587 3418 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 CA12O43570 354 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 FDX1P10109 184 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
TDP1-211ENST00000555178 FGD4Q96M96 766 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 GNA11P29992 359 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
TDP1-211ENST00000555178 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
TDP1-211ENST00000555178 MAP2K2P36507 400 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 GCLCP48506 637 aaPredicted RBP12.29□□□□□ -0.44
TDP1-211ENST00000555178 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
TDP1-211ENST00000555178 FAM110CQ1W6H9 321 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 GJA10Q969M2 543 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 SPATA32Q96LK8 384 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 CASP8AP2Q9UKL3 1982 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 GCOM1H8Y6P7 765 aaPredicted RBP12.29□□□□□ -0.44
TDP1-211ENST00000555178 PIK3CDO00329 1044 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 COBLO75128 1261 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 POLR2MP0CAP2 368 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 ANO1Q5XXA6 986 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
TDP1-211ENST00000555178 CRYGNQ8WXF5 182 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms