RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ALDH5A1P51649 535 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 ITGA7Q13683 1181 aa18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 TMEM199Q8N511 208 aa18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 TTC14Q96N46 770 aa18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 NEDD4P46934 1319 aa18.46■□□□□ 0.55
ARHGEF40-205ENST00000555052 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 ZEB2O60315 1214 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 FOSL2P15408 326 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 CYP2C18P33260 490 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 DUSP28Q4G0W2 176 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 PSRC1Q6PGN9 363 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 SLC30A10Q6XR72 485 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 MFSD6Q6ZSS7 791 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 XIRP2A4UGR9 3374 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
ARHGEF40-205ENST00000555052 SCN10AQ9Y5Y9 1956 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 RBM47A0AV96 593 aaKnown RBP18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 ACRP10323 421 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 SDSP20132 328 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 GRIN2CQ14957 1233 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 PLEKHM2Q8IWE5 1019 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 TIFAQ96CG3 184 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 HIPK3Q9H422 1215 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 RNF41Q9H4P4 317 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
ARHGEF40-205ENST00000555052 PTPDC1A2A3K4 754 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 B4GALT4O60513 344 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 EDNRBP24530 442 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 MFAP1P55081 439 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 PSMC6P62333 389 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 PBX4Q9BYU1 374 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 TRPV6Q9H1D0 765 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
ARHGEF40-205ENST00000555052 GRXCR1A8MXD5 290 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 NT5C2P49902 561 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 NUCB1Q02818 461 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 B4GALNT3Q6L9W6 998 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 RNF207Q6ZRF8 634 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 ESR2Q92731 530 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 WDR11Q9BZH6 1224 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF40-205ENST00000555052 IGHDP01880 384 aa18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 CALML3P27482 149 aa18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 PBX2P40425 430 aa18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 DGKHQ86XP1 1220 aa18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 CXXC1Q9P0U4 656 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF40-205ENST00000555052 PURAQ00577 322 aaKnown RBP18.4■□□□□ 0.54
ARHGEF40-205ENST00000555052 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
ARHGEF40-205ENST00000555052 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
ARHGEF40-205ENST00000555052 ZKSCAN3Q9BRR0 538 aa18.4■□□□□ 0.54
ARHGEF40-205ENST00000555052 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
ARHGEF40-205ENST00000555052 ZNF213O14771 459 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 CPT1AP50416 773 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 CCL23P55773 120 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 PNMA1Q8ND90 353 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 RGS22Q8NE09 1264 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 GBF1Q92538 1859 aa18.39■□□□□ 0.53
ARHGEF40-205ENST00000555052 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 KDM4AO75164 1064 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 FGBP02675 491 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 PDE4DQ08499 809 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 USP38Q8NB14 1042 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 OR6J1Q8NGC5 347 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 SCFD2Q8WU76 684 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 DSCC1Q9BVC3 393 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 MAF1Q9H063 256 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 TRMT13Q9NUP7 481 aaKnown RBP18.38■□□□□ 0.53
ARHGEF40-205ENST00000555052 A6NJR5 290 aa18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 USH1GQ495M9 461 aa18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 MTG1Q9BT17 334 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 MTIF3Q9H2K0 278 aaKnown RBP18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 TNKSO95271 1327 aa18.37■□□□□ 0.53
ARHGEF40-205ENST00000555052 B4E1Z4 1266 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 HIP1O00291 1037 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 ARIH2O95376 493 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms