RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TUBBP07437 444 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 NSFP46459 744 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ATP8B2P98198 1209 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ADCY1Q08828 1119 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MORC3Q14149 939 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 LLGL1Q15334 1064 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 DCAF15Q66K64 600 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 LRRC47Q8N1G4 583 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 SIX6OS1Q8N1H7 587 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 RNF139Q8WU17 664 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 RTEL1Q9NZ71 1219 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ANGEL1Q9UNK9 670 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ADGRL1O94910 1474 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 DPYSL4O14531 572 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 GSDMAQ96QA5 445 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MIS12Q9H081 205 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 DDX25Q9UHL0 483 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 SLC4A7Q9Y6M7 1214 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MAP3K7CLP57077 242 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 TMED2Q15363 201 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ZKSCAN8Q15776 578 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ELMOD1Q8N336 334 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ANKRD36BP1Q96IX9 119 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 VPS54Q9P1Q0 977 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 KCNJ18B7U540 433 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 CREB3O43889 395 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 KCNJ12Q14500 433 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 KIF19Q2TAC6 998 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 EPAS1Q99814 870 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 THEGQ9P2T0 379 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ZNF148Q9UQR1 794 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MYL3P08590 195 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 PPP1R2P41236 205 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 PSMD2Q13200 908 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 TNFAIP1Q13829 316 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 KCTD6Q8NC69 237 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MAP3K5Q99683 1374 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 H0YCG3 227 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 DDAH1O94760 285 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 PNOCQ13519 176 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MXD4Q14582 209 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 MFSD14BQ5SR56 506 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 RPGRIP1Q96KN7 1286 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 PANK4Q9NVE7 773 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 GPAA1O43292 621 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 LONP1P36776 959 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 CD109Q6YHK3 1445 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 GOLGA8QA0A0J9YX86 632 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 GOLGA8OA6NCC3 632 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 SMCO2A6NFE2 343 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 GOLGA8NF8WBI6 632 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 WBP4O75554 376 aaKnown RBP7.48□□□□□ -1.21
SYNE2-216ENST00000555002 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ATG3Q9NT62 314 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 TECP42680 631 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 FAM178BQ8IXR5 827 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 ERO1AQ96HE7 468 aa7.48□□□□□ -1.21
SYNE2-216ENST00000555002 SNAPC4Q5SXM2 1469 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 TTC41PQ6P2S7 1318 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 SH3TC1Q8TE82 1336 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 WDR91A4D1P6 747 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 TFAMQ00059 246 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 GPKOWQ92917 476 aaPredicted RBP eCLIP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 ESRRGP62508 458 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 RBBP7Q16576 425 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 MCF2L2Q86YR7 1114 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 DEPDC1BQ8WUY9 529 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 NUDCD1Q96RS6 583 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 IWS1Q96ST2 819 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 PSTPIP2Q9H939 334 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 PASKQ96RG2 1323 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 RECQLP46063 649 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 RAPGEF5Q92565 580 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 CAPN11Q9UMQ6 739 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 ZSCAN20P17040 1043 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 NLRP12P59046 1061 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 KCTD2Q14681 263 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 KRT80Q6KB66 452 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 CYP4F22Q6NT55 531 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 PDCD6IPQ8WUM4 868 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 URB1O60287 2271 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 PRPF4O43172 522 aaKnown RBP eCLIP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 TRIP13Q15645 432 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 AKAP4Q5JQC9 854 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 DARS2Q6PI48 645 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 HSPA8P11142 646 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 NCF2P19878 526 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 STAT1P42224 750 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 BTN2A2Q8WVV5 523 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 MRPL11Q9Y3B7 192 aaKnown RBP7.47□□□□□ -1.21
SYNE2-216ENST00000555002 MOCS3O95396 460 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 GOLGA5Q8TBA6 731 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 SH3KBP1Q96B97 665 aa7.47□□□□□ -1.21
SYNE2-216ENST00000555002 EDEM3Q9BZQ6 932 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms