RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CTGFP29279 349 aa19.83■□□□□ 0.77
SHOX-204ENST00000554971 FUT2Q10981 343 aa19.83■□□□□ 0.77
SHOX-204ENST00000554971 SNW1Q13573 536 aaKnown RBP19.83■□□□□ 0.77
SHOX-204ENST00000554971 STX1AQ16623 288 aa19.83■□□□□ 0.77
SHOX-204ENST00000554971 RANBP17Q9H2T7 1088 aaKnown RBP19.83■□□□□ 0.77
SHOX-204ENST00000554971 ZNFX1Q9P2E3 1918 aaKnown RBP19.83■□□□□ 0.76
SHOX-204ENST00000554971 GOLGA8AA7E2F4 631 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 AP5Z1O43299 807 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 RRP9O43818 475 aaKnown RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 TAL1P17542 331 aaPredicted RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 CDC25BP30305 580 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 ME1P48163 572 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 METAP2P50579 478 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHOX-204ENST00000554971 PLCB2Q00722 1185 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 RTN1Q16799 776 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 SARM1Q6SZW1 724 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 SYNE3Q6ZMZ3 975 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 TMTC3Q6ZXV5 915 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 MB21D1Q8N884 522 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 ZNF296Q8WUU4 475 aaPredicted RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 PORCNQ9H237 461 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 RIOX1Q9H6W3 641 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 R3HCC1Q9Y3T6 440 aaKnown RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 HSPA8P11142 646 aaKnown RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 KIF5BP33176 963 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 NOM1Q5C9Z4 860 aaKnown RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 LUZP1Q86V48 1076 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 LINC00301Q8NCQ3 95 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 GTF3C2Q8WUA4 911 aaPredicted RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 MRPS27Q92552 414 aaKnown RBP19.82■□□□□ 0.76
SHOX-204ENST00000554971 MTMR8Q96EF0 704 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 PRIMPOLQ96LW4 560 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 ANO10Q9NW15 660 aa19.82■□□□□ 0.76
SHOX-204ENST00000554971 NTRK3Q16288 839 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 CCDC82Q8N4S0 544 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 ARHGAP39Q9C0H5 1083 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 SPATC1LQ9H0A9 340 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 VAT1LQ9HCJ6 419 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 RIPK3Q9Y572 518 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 PLXNB2O15031 1838 aa19.81■□□□□ 0.76
SHOX-204ENST00000554971 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 PLA2G4DQ86XP0 818 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 GPRC5AQ8NFJ5 357 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 SPZ1Q9BXG8 430 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 MOV10L1Q9BXT6 1211 aaKnown RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 NAT10Q9H0A0 1025 aaKnown RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 RAVER2Q9HCJ3 691 aaKnown RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 ECM2O94769 699 aaPredicted RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 SP3Q02447 781 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 CEBPZQ03701 1054 aaKnown RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 CCDC174Q6PII3 467 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 CPXCR1Q8N123 301 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 FSIP1Q8NA03 581 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 KIAA1524Q8TCG1 905 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 AGBL1Q96MI9 1066 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 TTC12Q9H892 705 aaPredicted RBP19.8■□□□□ 0.76
SHOX-204ENST00000554971 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 CNTNAP5Q8WYK1 1306 aa19.8■□□□□ 0.76
SHOX-204ENST00000554971 GOLGA6L19H0YKK7 550 aa19.79■□□□□ 0.76
SHOX-204ENST00000554971 PPP1R11O60927 126 aaPredicted RBP19.79■□□□□ 0.76
SHOX-204ENST00000554971 ZNF75DP51815 510 aa19.79■□□□□ 0.76
SHOX-204ENST00000554971 LACTBP83111 547 aaPredicted RBP19.79■□□□□ 0.76
SHOX-204ENST00000554971 PLS1Q14651 629 aa19.79■□□□□ 0.76
SHOX-204ENST00000554971 STK38Q15208 465 aa19.79■□□□□ 0.76
SHOX-204ENST00000554971 CDC37Q16543 378 aaPredicted RBP19.79■□□□□ 0.76
SHOX-204ENST00000554971 FMR1NBQ8N0W7 255 aaPredicted RBP19.79■□□□□ 0.76
SHOX-204ENST00000554971 PIGSQ96S52 555 aa19.79■□□□□ 0.76
SHOX-204ENST00000554971 RBM28Q9NW13 759 aaKnown RBP19.79■□□□□ 0.76
SHOX-204ENST00000554971 hCG_1642624A0A1W2PR95 340 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 DYNC1I1O14576 645 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 ZBED4O75132 1171 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 PPFIA3O75145 1194 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 FDX1P10109 184 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 STAT3P40763 770 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 IQCB1Q15051 598 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 SF3A1Q15459 793 aaKnown RBP19.78■□□□□ 0.76
SHOX-204ENST00000554971 QRICH1Q2TAL8 776 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 SNRNP48Q6IEG0 339 aaKnown RBP19.78■□□□□ 0.76
SHOX-204ENST00000554971 TEX13BQ9BXU2 312 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 EFCC1Q9HA90 598 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 MKI67P46013 3256 aaKnown RBP19.78■□□□□ 0.76
SHOX-204ENST00000554971 SPTLC2O15270 562 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 SMARCA1P28370 1054 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 GNAQP50148 359 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 LBX1P52954 281 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 OAZ1P54368 228 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 WASF1Q92558 559 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 TRIM5Q9C035 493 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 DNAJC25Q9H1X3 360 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 GOLPH3LQ9H4A5 285 aa19.78■□□□□ 0.76
SHOX-204ENST00000554971 LCTP09848 1927 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 ICAM1P05362 532 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 GUCY1B3Q02153 619 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 PPP2R5BQ15173 497 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 RIOX2Q8IUF8 465 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 MRFAP1L1Q96HT8 127 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 TRIM47Q96LD4 638 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 LZTS2Q9BRK4 669 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms