RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GRB14Q14449 540 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 IQCB1Q15051 598 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 LUZP1Q86V48 1076 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 ELOA2Q8IYF1 753 aaPredicted RBP12.71□□□□□ -0.37
SRP54-205ENST00000554803 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.37
SRP54-205ENST00000554803 FERMT2Q96AC1 680 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
SRP54-205ENST00000554803 PYCARDQ9ULZ3 195 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 FOXP2O15409 715 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 SEPT4O43236 478 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 GPAA1O43292 621 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 AP5Z1O43299 807 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 PTGS1P23219 599 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 ADD1P35611 737 aaKnown RBP12.7□□□□□ -0.38
SRP54-205ENST00000554803 PBX2P40425 430 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 LRRC41Q15345 812 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
SRP54-205ENST00000554803 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 ENGASEQ8NFI3 743 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
SRP54-205ENST00000554803 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.38
SRP54-205ENST00000554803 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
SRP54-205ENST00000554803 TSPYL2Q9H2G4 693 aaPredicted RBP12.7□□□□□ -0.38
SRP54-205ENST00000554803 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
SRP54-205ENST00000554803 E7EWF7 191 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 IGFBP4P22692 258 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 CAMK4Q16566 473 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 OLFML2BQ68BL8 750 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
SRP54-205ENST00000554803 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
SRP54-205ENST00000554803 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 IKBKBO14920 756 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 PRKAB2O43741 272 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 JAK2O60674 1132 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 GPR37L1O60883 481 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 KIF20AO95235 890 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
SRP54-205ENST00000554803 PDIA3P30101 505 aaKnown RBP12.68□□□□□ -0.38
SRP54-205ENST00000554803 JAG1P78504 1218 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 STK3Q13188 491 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 RASIP1Q5U651 963 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 EMILIN3Q9NT22 766 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 GINM1Q9NU53 330 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
SRP54-205ENST00000554803 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
SRP54-205ENST00000554803 MYH8P13535 1937 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 CBFA2T2O43439 604 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 BAG3O95817 575 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 TNNT1P13805 278 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 TFF2Q03403 129 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
SRP54-205ENST00000554803 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
SRP54-205ENST00000554803 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 FMR1NBQ8N0W7 255 aaPredicted RBP12.67□□□□□ -0.38
SRP54-205ENST00000554803 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
SRP54-205ENST00000554803 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L11C9JVI0 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L18D6R9N7 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L22D6RA61 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L17D6RBQ6 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L19D6RCP7 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L20D6RJB6 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 PQBP1O60828 265 aaKnown RBP12.66□□□□□ -0.38
SRP54-205ENST00000554803 PLCG2P16885 1265 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 ME1P48163 572 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 KCNQ1P51787 676 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 USP17L24Q0WX57 530 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 PTPN14Q15678 1187 aa12.66□□□□□ -0.38
SRP54-205ENST00000554803 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms