RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ADAM11O75078 769 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 GRK4P32298 578 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 KIAA1211Q6ZU35 1233 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-229ENST00000554672 NCAPG2Q86XI2 1143 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 GTF3C2Q8WUA4 911 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-229ENST00000554672 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 ADAM19Q9H013 955 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 RNF208Q9H0X6 261 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 C1orf115Q9H7X2 142 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-229ENST00000554672 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-229ENST00000554672 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 GTF3C3Q9Y5Q9 886 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-229ENST00000554672 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 COL4A1P02462 1669 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 SOX1O00570 391 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 PDGFAP04085 211 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 GLB1P16278 677 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 FSTP19883 344 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 MPSTP25325 297 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 TNNI2P48788 182 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 DNM1Q05193 864 aaKnown RBP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 CHRNDQ07001 517 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 MTMR3Q13615 1198 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 VGLL4Q14135 290 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 ARMC10Q8N2F6 343 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 FOXD4L4Q8WXT5 416 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-229ENST00000554672 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 KLHDC7BQ96G42 594 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 TEPSINQ96N21 525 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 HHIPQ96QV1 700 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 CHRDQ9H2X0 955 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
ATXN3-229ENST00000554672 SCN9AQ15858 1988 aa6.15□□□□□ -1.43
ATXN3-229ENST00000554672 SSC5DA1L4H1 1573 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 CARNS1A5YM72 827 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-229ENST00000554672 CSF1RP07333 972 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 BMP8BP34820 402 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 EIF1AXP47813 144 aaKnown RBP6.14□□□□□ -1.43
ATXN3-229ENST00000554672 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 CCDC82Q8N4S0 544 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ATXN3-229ENST00000554672 DZANK1Q9NVP4 752 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
ATXN3-229ENST00000554672 AOX1Q06278 1338 aa6.14□□□□□ -1.43
ATXN3-229ENST00000554672 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 SNAP23O00161 211 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-229ENST00000554672 NPR3P17342 541 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 PTPRAP18433 802 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 MZF1P28698 734 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-229ENST00000554672 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 GNAI1P63096 354 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
ATXN3-229ENST00000554672 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 RALBP1Q15311 655 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 HGSNATQ68CP4 663 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 ACAD11Q709F0 780 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-229ENST00000554672 TMEM39BQ9GZU3 492 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms