RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	BTNL9	Q6UXG8	535 aa		31.28	■■■□□ 2.6
KTN1-215	ENST00000554567	MORC4	Q8TE76	937 aa		31.28	■■■□□ 2.6
KTN1-215	ENST00000554567	FAM227B	Q96M60	508 aa		31.28	■■■□□ 2.6
KTN1-215	ENST00000554567	SEZ6L	Q9BYH1	1024 aa		31.28	■■■□□ 2.6
KTN1-215	ENST00000554567	WDR11	Q9BZH6	1224 aa		31.28	■■■□□ 2.6
KTN1-215	ENST00000554567	FGA	P02671	866 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	FGR	P09769	529 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	IGFBP4	P22692	258 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	TJAP1	Q5JTD0	557 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	WNT8A	Q9H1J5	351 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	LCT	P09848	1927 aa		31.27	■■■□□ 2.6
KTN1-215	ENST00000554567	CALML3	P27482	149 aa		31.26	■■■□□ 2.59
KTN1-215	ENST00000554567	CCDC85B	Q15834	202 aa	Predicted RBP	31.26	■■■□□ 2.59
KTN1-215	ENST00000554567	SCLY	Q96I15	445 aa		31.26	■■■□□ 2.59
KTN1-215	ENST00000554567	SLC28A3	Q9HAS3	691 aa		31.26	■■■□□ 2.59
KTN1-215	ENST00000554567		A0A0D9SFI3	127 aa		31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	MYL3	P08590	195 aa		31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	PDE1A	P54750	535 aa		31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	HAND2	P61296	217 aa		31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	MCMDC2	Q4G0Z9	681 aa		31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	RPUSD2	Q8IZ73	545 aa	Known RBP	31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	YBX2	Q9Y2T7	364 aa	Known RBP	31.25	■■■□□ 2.59
KTN1-215	ENST00000554567	RABGGTB	P53611	331 aa		31.24	■■■□□ 2.59
KTN1-215	ENST00000554567	ADGRE1	Q14246	886 aa		31.24	■■■□□ 2.59
KTN1-215	ENST00000554567	SLC30A10	Q6XR72	485 aa		31.24	■■■□□ 2.59
KTN1-215	ENST00000554567	TRMT13	Q9NUP7	481 aa	Known RBP	31.24	■■■□□ 2.59
KTN1-215	ENST00000554567	POLR3E	Q9NVU0	708 aa		31.24	■■■□□ 2.59
KTN1-215	ENST00000554567	ZBBX	A8MT70	800 aa		31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	CYP2C9	P11712	490 aa		31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	AKNAD1	Q5T1N1	836 aa		31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	OR6J1	Q8NGC5	347 aa		31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	GPHN	Q9NQX3	736 aa	Predicted RBP	31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	SLC4A7	Q9Y6M7	1214 aa		31.23	■■■□□ 2.59
KTN1-215	ENST00000554567	HSPD1	P10809	573 aa	Known RBP	31.22	■■■□□ 2.59
KTN1-215	ENST00000554567	RNF207	Q6ZRF8	634 aa		31.22	■■■□□ 2.59
KTN1-215	ENST00000554567	CLEC4D	Q8WXI8	215 aa		31.22	■■■□□ 2.59
KTN1-215	ENST00000554567	TCP11L1	Q9NUJ3	509 aa		31.22	■■■□□ 2.59
KTN1-215	ENST00000554567	PDHB	P11177	359 aa		31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	CPT1A	P50416	773 aa		31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	PURA	Q00577	322 aa	Known RBP	31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	PDE4D	Q08499	809 aa		31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	PPP1R13L	Q8WUF5	828 aa		31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	GBF1	Q92538	1859 aa		31.21	■■■□□ 2.59
KTN1-215	ENST00000554567	SUPT20HL2	P0C7V6	817 aa		31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	MYOG	P15173	224 aa		31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	NMI	Q13287	307 aa	Predicted RBP	31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	FAM47C	Q5HY64	1035 aa		31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	CRBN	Q96SW2	442 aa		31.2	■■■□□ 2.59
KTN1-215	ENST00000554567	TNKS	O95271	1327 aa		31.2	■■■□□ 2.58
KTN1-215	ENST00000554567	RBM47	A0AV96	593 aa	Known RBP	31.19	■■■□□ 2.58
KTN1-215	ENST00000554567	RRP1	P56182	461 aa	Known RBP	31.19	■■■□□ 2.58
KTN1-215	ENST00000554567	MFSD6	Q6ZSS7	791 aa		31.19	■■■□□ 2.58
KTN1-215	ENST00000554567	DEFB128	Q7Z7B8	93 aa		31.19	■■■□□ 2.58
KTN1-215	ENST00000554567	MTG1	Q9BT17	334 aa	Predicted RBP	31.19	■■■□□ 2.58
KTN1-215	ENST00000554567	LOC102724159	A0A0B4J2E5	919 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	TRIM6-TRIM34	B2RNG4	842 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	RPS6	P62753	249 aa	Known RBP	31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	ZNF543	Q08ER8	600 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	PWP2	Q15269	919 aa	Known RBP	31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	VWCE	Q96DN2	955 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	MPHOSPH6	Q99547	160 aa	Known RBP	31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	THEG	Q9P2T0	379 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	TTC28	Q96AY4	2481 aa		31.18	■■■□□ 2.58
KTN1-215	ENST00000554567	PPP2R5B	Q15173	497 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	NBPF20	Q3BBV1	942 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	BRDT	Q58F21	947 aa	Predicted RBP	31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	PPP2R2D	Q66LE6	453 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	ATXN2L	Q8WWM7	1075 aa	Known RBP	31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	COPS5	Q92905	334 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	RILPL2	Q969X0	211 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	TTC14	Q96N46	770 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	PNMA2	Q9UL42	364 aa		31.17	■■■□□ 2.58
KTN1-215	ENST00000554567	TNFRSF10A	O00220	468 aa		31.16	■■■□□ 2.58
KTN1-215	ENST00000554567	ATP2A2	P16615	1042 aa	Known RBP	31.16	■■■□□ 2.58
KTN1-215	ENST00000554567	TTLL4	Q14679	1199 aa		31.16	■■■□□ 2.58
KTN1-215	ENST00000554567	USH1G	Q495M9	461 aa		31.16	■■■□□ 2.58
KTN1-215	ENST00000554567	ZKSCAN3	Q9BRR0	538 aa		31.16	■■■□□ 2.58
KTN1-215	ENST00000554567	CHD9	Q3L8U1	2897 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	GOLGA8H	P0CJ92	632 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	CHMP4BP1	P59074	171 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	SCFD2	Q8WU76	684 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	ASB2	Q96Q27	587 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	PCDHA11	Q9Y5I1	949 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	CCDC171	Q6TFL3	1326 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	RAD50	Q92878	1312 aa		31.15	■■■□□ 2.58
KTN1-215	ENST00000554567	TBC1D10C	Q8IV04	446 aa		31.14	■■■□□ 2.58
KTN1-215	ENST00000554567	MICALL1	Q8N3F8	863 aa		31.14	■■■□□ 2.58
KTN1-215	ENST00000554567	UBA5	Q9GZZ9	404 aa		31.14	■■■□□ 2.58
KTN1-215	ENST00000554567	CPVL	Q9H3G5	476 aa		31.14	■■■□□ 2.58
KTN1-215	ENST00000554567	NKRF	O15226	690 aa	Known RBP eCLIP	31.13	■■■□□ 2.57	3e-6	■□□□□ 9.9
KTN1-215	ENST00000554567	TXN	P10599	105 aa	Known RBP	31.13	■■■□□ 2.57
KTN1-215	ENST00000554567	DNER	Q8NFT8	737 aa		31.13	■■■□□ 2.57
KTN1-215	ENST00000554567	LNPK	Q9C0E8	428 aa		31.13	■■■□□ 2.57
KTN1-215	ENST00000554567	ZMYM6	O95789	1325 aa		31.13	■■■□□ 2.57
KTN1-215	ENST00000554567	WDR19	Q8NEZ3	1342 aa		31.13	■■■□□ 2.57
KTN1-215	ENST00000554567	PFKM	P08237	780 aa		31.12	■■■□□ 2.57
KTN1-215	ENST00000554567	SNHG28	P0DPA3	235 aa		31.12	■■■□□ 2.57
KTN1-215	ENST00000554567	EDNRB	P24530	442 aa		31.12	■■■□□ 2.57

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