RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 VAT1LQ9HCJ6 419 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 STARD7Q9NQZ5 370 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 MAD2L2Q9UI95 211 aa10.17□□□□□ -0.78
ACTN1-213ENST00000554508 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 MRPL11Q9Y3B7 192 aaKnown RBP10.17□□□□□ -0.78
ACTN1-213ENST00000554508 MROH7Q68CQ1 1323 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 RBM47A0AV96 593 aaKnown RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 ZEB2O60315 1214 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 ASGR1P07306 291 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 MDM2Q00987 491 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 PDE4DQ08499 809 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 TRAF1Q13077 416 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 QRICH1Q2TAL8 776 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 STOX1Q6ZVD7 989 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 FBXO16Q8IX29 292 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 MB21D2Q8IYB1 491 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 TDHQ8IZJ6 230 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 AMNQ9BXJ7 453 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 SEZ6LQ9BYH1 1024 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 MAP3K20Q9NYL2 800 aaKnown RBP10.16□□□□□ -0.78
ACTN1-213ENST00000554508 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
ACTN1-213ENST00000554508 MYADML2A6NDP7 307 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 DCDC2CA8MYV0 355 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 NKRFO15226 690 aaKnown RBP eCLIP10.15□□□□□ -0.78
ACTN1-213ENST00000554508 CTAGE5O15320 804 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 DYNC1LI2O43237 492 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-213ENST00000554508 CABYRO75952 493 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 CLTBP09497 229 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 SMPD1P17405 629 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 EDNRBP24530 442 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 MCM5P33992 734 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 TROAPQ12815 778 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 GRM4Q14833 912 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 NECTIN1Q15223 517 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 LRIT3Q3SXY7 679 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 DUSP28Q4G0W2 176 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 TMEM67Q5HYA8 995 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 CASC1Q6TDU7 716 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 EEPD1Q7L9B9 569 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 ANKRD33Q7Z3H0 272 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 CATIPQ7Z7H3 387 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 TLK2Q86UE8 772 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 IGDCC4Q8TDY8 1250 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 MTMR8Q96EF0 704 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 MAP3K14Q99558 947 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 WDR11Q9BZH6 1224 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 RIOX1Q9H6W3 641 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 PRDM5Q9NQX1 630 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-213ENST00000554508 PDLIM7Q9NR12 457 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 PDGFCQ9NRA1 345 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 TAF6LQ9Y6J9 622 aa10.15□□□□□ -0.78
ACTN1-213ENST00000554508 A0A0U1RQG5 324 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-213ENST00000554508 ARVCFO00192 962 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 SLC27A2O14975 620 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 ZBTB5O15062 677 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 CDK7P50613 346 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 ANTXR2P58335 489 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-213ENST00000554508 BEX3Q00994 111 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 GHRHRQ02643 423 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 FSCN1Q16658 493 aaKnown RBP10.14□□□□□ -0.79
ACTN1-213ENST00000554508 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 CHST3Q7LGC8 479 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 SYTL5Q8TDW5 730 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-213ENST00000554508 NSUN6Q8TEA1 469 aaKnown RBP10.14□□□□□ -0.79
ACTN1-213ENST00000554508 SCFD2Q8WU76 684 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 TMEM87BQ96K49 555 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 IWS1Q96ST2 819 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 ANO2Q9NQ90 1003 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 TMEM39AQ9NV64 488 aa10.14□□□□□ -0.79
ACTN1-213ENST00000554508 PNMA6FA0A0J9YX94 578 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 TRIM43BA6NCK2 446 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 KIAA0355O15063 1070 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 TLR3O15455 904 aaKnown RBP10.13□□□□□ -0.79
ACTN1-213ENST00000554508 PRC1O43663 620 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 PQBP1O60828 265 aaKnown RBP10.13□□□□□ -0.79
ACTN1-213ENST00000554508 CDC45O75419 566 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 SMARCA1P28370 1054 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 CPT1AP50416 773 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 FAAP100Q0VG06 881 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 TTLL4Q14679 1199 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 STXBP2Q15833 593 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 BRDTQ58F21 947 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-213ENST00000554508 CREB3L3Q68CJ9 461 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 SH3RF1Q7Z6J0 888 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 BADQ92934 168 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 TRIM43Q96BQ3 446 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms