RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 EIF2AK4Q9P2K8 1649 aaKnown RBP5.82□□□□□ -1.48
ATXN3-227ENST00000554491 A0A0G2JLL6 359 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-227ENST00000554491 TRIM13O60858 407 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 FKTNO75072 461 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
ATXN3-227ENST00000554491 FBXL19Q6PCT2 694 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 CEP128Q6ZU80 1094 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 DAGLBQ8NCG7 672 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 HHIPL1Q96JK4 782 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 KCNC2Q96PR1 638 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 MBD1Q9UIS9 605 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-227ENST00000554491 TCFL5Q9UL49 500 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 MINPP1Q9UNW1 487 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 RTEL1-TNFRSF6BF6WH68 1400 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 TET3O43151 1660 aa5.82□□□□□ -1.48
ATXN3-227ENST00000554491 DHX29Q7Z478 1369 aaKnown RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 NRDCO43847 1150 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 RAG1P15918 1043 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 PI3P19957 117 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 EPHB3P54753 998 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 CHMP4BP1P59074 171 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 RBM6P78332 1123 aaKnown RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 SRSF3P84103 164 aaKnown RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 PWP1Q13610 501 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 NBPF9Q3BBW0 867 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 BBS9Q3SYG4 887 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 ZNF385BQ569K4 471 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 NBPF12Q5TAG4 269 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 TCERG1LQ5VWI1 586 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 RELTQ969Z4 430 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 BRMS1Q9HCU9 246 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 SUPT16HQ9Y5B9 1047 aaKnown RBP5.81□□□□□ -1.48
ATXN3-227ENST00000554491 PCDHB14Q9Y5E9 798 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 SPHKAPQ2M3C7 1700 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 BCL9LQ86UU0 1499 aa5.81□□□□□ -1.48
ATXN3-227ENST00000554491 UNC13BO14795 1591 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 PRAMEF1O95521 474 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 SYPP08247 313 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 VIPR1P32241 457 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 PCBP3P57721 371 aaKnown RBP5.8□□□□□ -1.48
ATXN3-227ENST00000554491 RNF4P78317 190 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 IRX6P78412 446 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-227ENST00000554491 KIR3DS1Q14943 382 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 ERMP1Q7Z2K6 904 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 AEBP1Q8IUX7 1158 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 ZNF655Q8N720 491 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-227ENST00000554491 MARCH10Q8NA82 808 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-227ENST00000554491 LINC00116Q8NCU8 138 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 ZNF512BQ96KM6 892 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-227ENST00000554491 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 GMIPQ9P107 970 aa5.8□□□□□ -1.48
ATXN3-227ENST00000554491 EFCAB6Q5THR3 1501 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 WASHC2CQ9Y4E1 1318 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 MBD5Q9P267 1494 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 PTMSP20962 102 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 KIR2DL1P43626 348 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 KIR2DL2P43627 348 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 CRKP46108 304 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 HNRNPMP52272 730 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 CWF19L2Q2TBE0 894 aaKnown RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 OVOS1Q6IE37 1185 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 SECISBP2LQ93073 1101 aaKnown RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 SIGLEC10Q96LC7 697 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 PRDM14Q9GZV8 571 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 CNTD2Q9H8S5 307 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 EPB41L4AQ9HCS5 686 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 CRTAC1Q9NQ79 661 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 SIRT5Q9NXA8 310 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 IRAK3Q9Y616 596 aa5.79□□□□□ -1.48
ATXN3-227ENST00000554491 MARF1Q9Y4F3 1742 aaKnown RBP5.79□□□□□ -1.48
ATXN3-227ENST00000554491 BRWD3Q6RI45 1802 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 CCDC141Q6ZP82 1450 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 SSU72P8A0A1W2PR75 194 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 RFXAPO00287 272 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 FOXD2O60548 495 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 GREM1O60565 184 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 ATE1O95260 518 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 PTMAP06454 111 aaKnown RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 KCNA6P17658 529 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 CANXP27824 592 aaKnown RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 RTP1P59025 263 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 CNGB1Q14028 1251 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 DACT3Q96B18 629 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 LRRC3Q9BY71 257 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 SETD5Q9C0A6 1442 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATXN3-227ENST00000554491 KCNQ5Q9NR82 932 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 ADGRB3O60242 1522 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 TMEM2Q9UHN6 1383 aa5.78□□□□□ -1.48
ATXN3-227ENST00000554491 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-227ENST00000554491 EEA1Q15075 1411 aa5.77□□□□□ -1.49
ATXN3-227ENST00000554491 CASKIN1Q8WXD9 1431 aa5.77□□□□□ -1.49
ATXN3-227ENST00000554491 MYO5BQ9ULV0 1848 aa5.77□□□□□ -1.49
ATXN3-227ENST00000554491 HRKO00198 91 aa5.77□□□□□ -1.49
ATXN3-227ENST00000554491 MEIS1O00470 390 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms