RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SUSD4Q5VX71 490 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 ANKRD34AQ69YU3 496 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 SYNE4Q8N205 404 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 JARID2Q92833 1246 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-212ENST00000554486 GAL3ST3Q96A11 431 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 TMEM74Q96NL1 305 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
SCFD1-212ENST00000554486 PCDHGB7Q9Y5F8 929 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 NTSR2O95665 410 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 PCCAP05165 728 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-212ENST00000554486 GNAI3P08754 354 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 DDR1Q08345 913 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 R3HDM1Q15032 1099 aaKnown RBP7.85□□□□□ -1.15
SCFD1-212ENST00000554486 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 ZBTB38Q8NAP3 1195 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-212ENST00000554486 KAZALD1Q96I82 304 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 UBL7Q96S82 380 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-212ENST00000554486 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 KCNQ5Q9NR82 932 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 C9orf78Q9NZ63 289 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-212ENST00000554486 ADAMTS1Q9UHI8 967 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 CYP8B1Q9UNU6 501 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 RAXQ9Y2V3 346 aa7.85□□□□□ -1.15
SCFD1-212ENST00000554486 DDX60Q8IY21 1712 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 NRXN2Q9P2S2 1712 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 MYH3P11055 1940 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 MEGF11A6BM72 1044 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 POLRMTO00411 1230 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 GSC2O15499 205 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 PF4P02776 101 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 UBTFL1P0CB47 393 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 EPHA10Q5JZY3 1008 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 LLGL2Q6P1M3 1020 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 FDX2Q6P4F2 183 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 PPP1R42Q7Z4L9 355 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 UTP4Q969X6 686 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 FAM89AQ96GI7 184 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 SUCLG2Q96I99 432 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 UTP14AQ9BVJ6 771 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 STOML1Q9UBI4 398 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 TRMT112Q9UI30 125 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 LRRFIP2Q9Y608 721 aaKnown RBP7.84□□□□□ -1.15
SCFD1-212ENST00000554486 LAMB2P55268 1798 aa7.84□□□□□ -1.15
SCFD1-212ENST00000554486 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.16
SCFD1-212ENST00000554486 ABCC12Q96J65 1359 aa7.84□□□□□ -1.16
SCFD1-212ENST00000554486 CDHR2Q9BYE9 1310 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 GNAI2P04899 355 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 MMP10P09238 476 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 LIG1P18858 919 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 GBP2P32456 591 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-212ENST00000554486 CAMK2GQ13555 558 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-212ENST00000554486 SEPT6Q14141 434 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 FBXL19Q6PCT2 694 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 ANKRD44Q8N8A2 993 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 KCNB2Q92953 911 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 WDR18Q9BV38 432 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 EMILIN2Q9BXX0 1053 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 CHMP4BQ9H444 224 aaKnown RBP7.83□□□□□ -1.16
SCFD1-212ENST00000554486 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 CYP4F12Q9HCS2 524 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 KRT82Q9NSB4 513 aa7.83□□□□□ -1.16
SCFD1-212ENST00000554486 SH3TC1Q8TE82 1336 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 SCO2A0A1W2PP80 73 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 SERPINB2P05120 415 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 HCLS1P14317 486 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 CDK8P49336 464 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 FOXO4P98177 505 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 LMNB2Q03252 620 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 SLC10A5Q5PT55 438 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 PRR5LQ6MZQ0 368 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 TRIM42Q8IWZ5 723 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 SIRT2Q8IXJ6 389 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 Q8N3U1 123 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 ANKRD31Q8N7Z5 1873 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 FAM46AQ96IP4 442 aaKnown RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 PLA2G12BQ9BX93 195 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 BICC1Q9H694 974 aaKnown RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
SCFD1-212ENST00000554486 TNRC6CQ9HCJ0 1690 aaKnown RBP7.82□□□□□ -1.16
SCFD1-212ENST00000554486 FAM221AA4D161 298 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 GREM1O60565 184 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 PDE8AO60658 829 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 AOC2O75106 756 aa7.81□□□□□ -1.16
SCFD1-212ENST00000554486 ZBTB7AO95365 584 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms