RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 CABYRO75952 493 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 FGAP02671 866 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 FGBP02675 491 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 SMPD1P17405 629 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 HSPA4P34932 840 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 ITGA7Q13683 1181 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 FBXO16Q8IX29 292 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 KCNB2Q92953 911 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 TBC1D32Q96NH3 1257 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 MTIF3Q9H2K0 278 aaKnown RBP16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 MSRAQ9UJ68 235 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 GNEQ9Y223 722 aaKnown RBP16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 UMODL1Q5DID0 1318 aa16.43■□□□□ 0.22
SPTLC2-202ENST00000554365 ZEB2O60315 1214 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 NMT2O60551 498 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 CCL23P55773 120 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 RAB30Q15771 203 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 NSMFQ6X4W1 530 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 HERVK_113Q902F9 699 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 C22orf23Q9BZE7 217 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 CYP39A1Q9NYL5 469 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
SPTLC2-202ENST00000554365 SLC27A2O14975 620 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 PLA2G6O60733 806 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 PSMC6P62333 389 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 TMEM63BQ5T3F8 832 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 TRPV6Q9H1D0 765 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 NKX2-4Q9H2Z4 354 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 LRRC37A2A6NM11 1700 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
SPTLC2-202ENST00000554365 B4GALT4O60513 344 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 RANBP6O60518 1105 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 IGFBP4P22692 258 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 CCDC85BQ15834 202 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 CREB3L3Q68CJ9 461 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 KIF2CQ99661 725 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
SPTLC2-202ENST00000554365 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 CYP21A2P08686 494 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 ADGRE1Q14246 886 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 VTA1Q9NP79 307 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
SPTLC2-202ENST00000554365 ZBBXA8MT70 800 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 ICAM1P05362 532 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 SLC16A2P36021 539 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 BAATQ14032 418 aaPredicted RBP16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 ATXN2LQ8WWM7 1075 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 SCLYQ96I15 445 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 SEZ6LQ9BYH1 1024 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 WNT8AQ9H1J5 351 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 YBX2Q9Y2T7 364 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 Q9Y3F1 56 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 SNX14Q9Y5W7 946 aa16.38■□□□□ 0.21
SPTLC2-202ENST00000554365 RABGGTBP53611 331 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 HAND2P61296 217 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 WDR11Q9BZH6 1224 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 SLC4A7Q9Y6M7 1214 aa16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
SPTLC2-202ENST00000554365 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
SPTLC2-202ENST00000554365 NFIBO00712 420 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms