RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 LEMD3Q9Y2U8 911 aa7.56□□□□□ -1.2
ATXN3-226ENST00000554350 UBR2Q8IWV8 1755 aa7.56□□□□□ -1.2
ATXN3-226ENST00000554350 IRS2Q9Y4H2 1338 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 IGHA2P01877 340 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 PRNPP04156 253 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 SERPINB4P48594 390 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 USP11P51784 963 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 PTPN12Q05209 780 aaKnown RBP7.55□□□□□ -1.2
ATXN3-226ENST00000554350 TEFQ10587 303 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 KIAA0319Q5VV43 1072 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 PAOXQ6QHF9 649 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 ZAR1Q86SH2 424 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 SNX27Q96L92 541 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 TESK2Q96S53 571 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 OSBPL1AQ9BXW6 950 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 RTFDC1Q9BY42 306 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-226ENST00000554350 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
ATXN3-226ENST00000554350 RIC1Q4ADV7 1423 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 FAM170BA6NMN3 283 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATXN3-226ENST00000554350 FARP2O94887 1054 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-226ENST00000554350 B3GALT4O96024 378 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 INHBEP58166 350 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 MAP3K12Q12852 859 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 COL19A1Q14993 1142 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 HLFQ16534 295 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 SIN3AQ96ST3 1273 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 GSX1Q9H4S2 264 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-226ENST00000554350 ZNF576Q9H609 170 aa7.54□□□□□ -1.2
ATXN3-226ENST00000554350 ITPKAP23677 461 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 GPTP24298 496 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 CAP1Q01518 475 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 ORC1Q13415 861 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 POU4F3Q15319 338 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 FAM129BQ96TA1 746 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 KCNQ5Q9NR82 932 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 FAM105AQ9NUU6 356 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 BIN2Q9UBW5 565 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-226ENST00000554350 ANGEL1Q9UNK9 670 aaKnown RBP7.53□□□□□ -1.2
ATXN3-226ENST00000554350 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 TTC28Q96AY4 2481 aa7.53□□□□□ -1.2
ATXN3-226ENST00000554350 ABCC4O15439 1325 aa7.52□□□□□ -1.2
ATXN3-226ENST00000554350 H3BRB1 525 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 ECE2O60344 883 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 NFICP08651 508 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 TXKP42681 527 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 LRIT3Q3SXY7 679 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 CBLL1Q75N03 491 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 SP8Q8IXZ3 490 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 MAFAQ8NHW3 353 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-226ENST00000554350 TBC1D32Q96NH3 1257 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 GUCD1Q96NT3 240 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 TUT1Q9H6E5 874 aaKnown RBP7.52□□□□□ -1.21
ATXN3-226ENST00000554350 ZMYND8Q9ULU4 1186 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-226ENST00000554350 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
ATXN3-226ENST00000554350 DYNC1LI2O43237 492 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-226ENST00000554350 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-226ENST00000554350 BBOX1O75936 387 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 CYP11A1P05108 521 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 HMOX1P09601 288 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 KIF22Q14807 665 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 DIEXFQ68CQ4 756 aaKnown RBP7.51□□□□□ -1.21
ATXN3-226ENST00000554350 C7orf61Q8IZ16 206 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 TDHQ8IZJ6 230 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 METTL22Q9BUU2 404 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-226ENST00000554350 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 NPHS2Q9NP85 383 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 MYOZ2Q9NPC6 264 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 BRPF3Q9ULD4 1205 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 TIMELESSQ9UNS1 1208 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
ATXN3-226ENST00000554350 RTL9Q8NET4 1388 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 CCL5P13501 91 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 BMP8BP34820 402 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 GJA8P48165 433 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
ATXN3-226ENST00000554350 SUSD4Q5VX71 490 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 DDX46Q7L014 1031 aaKnown RBP7.5□□□□□ -1.21
ATXN3-226ENST00000554350 WNK4Q96J92 1243 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 GDF15Q99988 308 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 C1GALT1Q9NS00 363 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 FZD1Q9UP38 647 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 KDM3BQ7LBC6 1761 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 VCANP13611 3396 aa7.5□□□□□ -1.21
ATXN3-226ENST00000554350 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-226ENST00000554350 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 GPR182O15218 404 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 CYP26A1O43174 497 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 KCNQ3O43525 872 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 GJB1P08034 283 aa7.49□□□□□ -1.21
ATXN3-226ENST00000554350 ZBTB48P10074 688 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms