RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 TRPC6Q9Y210 931 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 CTDP1Q9Y5B0 961 aaPredicted RBP20.25■□□□□ 0.83
NEK9-204ENST00000554258 COL4A6Q14031 1691 aa20.25■□□□□ 0.83
NEK9-204ENST00000554258 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
NEK9-204ENST00000554258 CNTN2Q02246 1040 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.83
NEK9-204ENST00000554258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
NEK9-204ENST00000554258 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 POLR3EQ9NVU0 708 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 Q9Y3F1 56 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 DMXL1Q9Y485 3027 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 SCN10AQ9Y5Y9 1956 aa20.24■□□□□ 0.83
NEK9-204ENST00000554258 BAHCC1Q9P281 2608 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 H0Y858 1186 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 VCPP55072 806 aaKnown RBP20.23■□□□□ 0.83
NEK9-204ENST00000554258 COL19A1Q14993 1142 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 CLUL1Q15846 466 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 EXOC6Q8TAG9 804 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 FSD1Q9BTV5 496 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
NEK9-204ENST00000554258 ZNF292O60281 2723 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 ASB14A6NK59 587 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 ZBED4O75132 1171 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 LRRFIP1Q32MZ4 808 aaKnown RBP20.22■□□□□ 0.83
NEK9-204ENST00000554258 IQSEC1Q6DN90 963 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 DYNLL2Q96FJ2 89 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
NEK9-204ENST00000554258 PDGFCQ9NRA1 345 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
NEK9-204ENST00000554258 STXBP3O00186 592 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 MYL3P08590 195 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 CYP2D6P10635 497 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 ATP8B2P98198 1209 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 CCDC17Q96LX7 622 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 CRNKL1Q9BZJ0 848 aaKnown RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 NSUN3Q9H649 340 aaKnown RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
NEK9-204ENST00000554258 ACACBO00763 2458 aa20.21■□□□□ 0.83
NEK9-204ENST00000554258 MBTPS2O43462 519 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 ZXDAP98168 799 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 PURAQ00577 322 aaKnown RBP20.2■□□□□ 0.82
NEK9-204ENST00000554258 NBPF20Q3BBV1 942 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 CNKSR3Q6P9H4 555 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 EEPD1Q7L9B9 569 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 RPAINQ86UA6 219 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 RPAP2Q8IXW5 612 aaPredicted RBP20.2■□□□□ 0.82
NEK9-204ENST00000554258 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 PRPF38AQ8NAV1 312 aaKnown RBP20.2■□□□□ 0.82
NEK9-204ENST00000554258 PPP1R13LQ8WUF5 828 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 MTG1Q9BT17 334 aaPredicted RBP20.2■□□□□ 0.82
NEK9-204ENST00000554258 KANSL2Q9H9L4 492 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 HOMER2Q9NSB8 354 aa20.2■□□□□ 0.82
NEK9-204ENST00000554258 MICAL3Q7RTP6 2002 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 MAGEB6P1A0A0J9YX57 407 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 NCK2O43639 380 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 AVPR2P30518 371 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 LTBRP36941 435 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
NEK9-204ENST00000554258 TNNI3KQ59H18 835 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 FBXO16Q8IX29 292 aaPredicted RBP20.19■□□□□ 0.82
NEK9-204ENST00000554258 CCDC155Q8N6L0 562 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 INSL6Q9Y581 213 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 FPGT-TNNI3KV9GXZ4 949 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 NLRC5Q86WI3 1866 aa20.19■□□□□ 0.82
NEK9-204ENST00000554258 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
NEK9-204ENST00000554258 EP300Q09472 2414 aaPredicted RBP20.18■□□□□ 0.82
NEK9-204ENST00000554258 DNAH14Q0VDD8 3507 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 ABHD14A-ACY1A0A1B0GW23 586 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 KDM4AO75164 1064 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 EPC2Q52LR7 807 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 TAPT1Q6NXT6 567 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 NFRKBQ6P4R8 1299 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 TMED8Q6PL24 325 aaPredicted RBP20.18■□□□□ 0.82
NEK9-204ENST00000554258 SSH3Q8TE77 659 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 AFAP1L1Q8TED9 768 aa20.18■□□□□ 0.82
NEK9-204ENST00000554258 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
NEK9-204ENST00000554258 ATG2AQ2TAZ0 1938 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 CHD8Q9HCK8 2581 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 MED19A0JLT2 244 aaPredicted RBP20.17■□□□□ 0.82
NEK9-204ENST00000554258 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 USP17L21D6R901 530 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 CPT1AP50416 773 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 SMAD4Q13485 552 aaKnown RBP20.17■□□□□ 0.82
NEK9-204ENST00000554258 GPM6BQ13491 265 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 POLA2Q14181 598 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 KIAA1211Q6ZU35 1233 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 KIFC2Q96AC6 838 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 SAMD11Q96NU1 681 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms