RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
ACTN1-211ENST00000553882 NOC4LQ9BVI4 516 aaKnown RBP16.29■□□□□ 0.2
ACTN1-211ENST00000553882 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
ACTN1-211ENST00000553882 NT5C2P49902 561 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 AMPD2Q01433 879 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 CUEDC2Q9H467 287 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.28■□□□□ 0.2
ACTN1-211ENST00000553882 POTEMA6NI47 508 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 SLC37A4O43826 429 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 CYP27A1Q02318 531 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 WHAMMP3Q1A5X7 153 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-211ENST00000553882 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 DUSP10Q9Y6W6 482 aa16.28■□□□□ 0.2
ACTN1-211ENST00000553882 BICDL2A1A5D9 508 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 H3BQF6 201 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 TDP2O95551 362 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.2
ACTN1-211ENST00000553882 PDHBP11177 359 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 CYP2C19P33261 490 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 CALML4Q96GE6 196 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 TTYH3Q9C0H2 523 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 LACRTQ9GZZ8 138 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 CDK5RAP2Q96SN8 1893 aa16.27■□□□□ 0.2
ACTN1-211ENST00000553882 C6orf229H3BNL8 230 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 TUBB2AQ13885 445 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 CALCRLQ16602 461 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 MIIPQ5JXC2 388 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 DHX37Q8IY37 1157 aaKnown RBP16.27■□□□□ 0.19
ACTN1-211ENST00000553882 MSANTD4Q8NCY6 345 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 NEK11Q8NG66 645 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 UIMC1Q96RL1 719 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 TUBB2BQ9BVA1 445 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.19
ACTN1-211ENST00000553882 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 LRWD1Q9UFC0 647 aa16.27■□□□□ 0.19
ACTN1-211ENST00000553882 GJA10Q969M2 543 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
ACTN1-211ENST00000553882 RAB21Q9UL25 225 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 PLEKP08567 350 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-211ENST00000553882 IL1R1P14778 569 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 AMPD3Q01432 767 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 GRB10Q13322 594 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
ACTN1-211ENST00000553882 PDE11AQ9HCR9 933 aa16.26■□□□□ 0.19
ACTN1-211ENST00000553882 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-211ENST00000553882 MACROD2A1Z1Q3 448 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 MYMKA6NI61 221 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 IDEP14735 1019 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 PLCG2P16885 1265 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 TNNI2P48788 182 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 GTF2IP78347 998 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 MEA1Q16626 185 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 CDK5RAP3Q96JB5 506 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 MAP2K7O14733 419 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 RIMBP2O15034 1052 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
ACTN1-211ENST00000553882 AKR1B1P15121 316 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 TRAPPC11Q7Z392 1133 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 KRT26Q7Z3Y9 468 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 FAM207AQ9NSI2 230 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-211ENST00000553882 USP21Q9UK80 565 aa16.25■□□□□ 0.19
ACTN1-211ENST00000553882 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 PSMD14O00487 310 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 KRT83P78385 493 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 ZBED6P86452 979 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 UBE2SQ16763 222 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-211ENST00000553882 C15orf52Q6ZUT6 534 aaKnown RBP16.24■□□□□ 0.19
ACTN1-211ENST00000553882 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 GLIS3Q8NEA6 775 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 TBC1D16Q8TBP0 767 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 HNRNPLLQ8WVV9 542 aaKnown RBP16.24■□□□□ 0.19
ACTN1-211ENST00000553882 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 DAGLAQ9Y4D2 1042 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 EPHB6O15197 1021 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 ZBTB22O15209 634 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 KRT86O43790 486 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
ACTN1-211ENST00000553882 ERLIN1O75477 346 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 SLURP2P0DP57 97 aa16.24■□□□□ 0.19
ACTN1-211ENST00000553882 CYLC1P35663 651 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms