RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 CALM2P0DP24 149 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 CALM3P0DP25 149 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 CPA1P15085 419 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 EXOSC10Q01780 885 aaKnown RBP23.69■■□□□ 1.38
XRCC3-205ENST00000553807 MCF2L2Q86YR7 1114 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 C7orf61Q8IZ16 206 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 RGS22Q8NE09 1264 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 TBC1D5Q92609 795 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 KCNB2Q92953 911 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 NR2E3Q9Y5X4 410 aa23.69■■□□□ 1.38
XRCC3-205ENST00000553807 HMGB1P09429 215 aaKnown RBP23.68■■□□□ 1.38
XRCC3-205ENST00000553807 FGD1P98174 961 aa23.68■■□□□ 1.38
XRCC3-205ENST00000553807 SYNE3Q6ZMZ3 975 aa23.68■■□□□ 1.38
XRCC3-205ENST00000553807 NOL8Q76FK4 1167 aaKnown RBP23.68■■□□□ 1.38
XRCC3-205ENST00000553807 RNF180Q86T96 592 aa23.68■■□□□ 1.38
XRCC3-205ENST00000553807 SGMS1Q86VZ5 419 aa23.68■■□□□ 1.38
XRCC3-205ENST00000553807 BAZ2BQ9UIF8 2168 aaKnown RBP23.68■■□□□ 1.38
XRCC3-205ENST00000553807 ADCYAP1R1P41586 468 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 GNAQP50148 359 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 ATN1P54259 1190 aaPredicted RBP23.67■■□□□ 1.38
XRCC3-205ENST00000553807 PDE4DQ08499 809 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 CMTR1Q8N1G2 835 aaKnown RBP23.67■■□□□ 1.38
XRCC3-205ENST00000553807 SYTL5Q8TDW5 730 aaPredicted RBP23.67■■□□□ 1.38
XRCC3-205ENST00000553807 MPHOSPH6Q99547 160 aaKnown RBP23.67■■□□□ 1.38
XRCC3-205ENST00000553807 LZTS2Q9BRK4 669 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 SPZ1Q9BXG8 430 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 VTA1Q9NP79 307 aa23.67■■□□□ 1.38
XRCC3-205ENST00000553807 PNMA6FA0A0J9YX94 578 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.66■■□□□ 1.38
XRCC3-205ENST00000553807 ADAMTS4O75173 837 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 DUSP11O75319 330 aaKnown RBP23.66■■□□□ 1.38
XRCC3-205ENST00000553807 CFBP00751 764 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 LRRC26Q2I0M4 334 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 APOA5Q6Q788 366 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 BLOC1S2Q6QNY1 142 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 MORC4Q8TE76 937 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 FERMT2Q96AC1 680 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 RRP36Q96EU6 259 aaKnown RBP23.66■■□□□ 1.38
XRCC3-205ENST00000553807 PDGFCQ9NRA1 345 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 COL20A1Q9P218 1284 aa23.66■■□□□ 1.38
XRCC3-205ENST00000553807 NAP1L2Q9ULW6 460 aaPredicted RBP23.66■■□□□ 1.38
XRCC3-205ENST00000553807 CEP290O15078 2479 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 LOC102724159A0A0B4J2E5 919 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 OPLAHO14841 1288 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 C6orf222P0C671 652 aaPredicted RBP23.65■■□□□ 1.38
XRCC3-205ENST00000553807 TNFAIP2Q03169 654 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 TRAF1Q13077 416 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 PWP2Q15269 919 aaKnown RBP23.65■■□□□ 1.38
XRCC3-205ENST00000553807 SRBD1Q8N5C6 995 aaKnown RBP23.65■■□□□ 1.38
XRCC3-205ENST00000553807 FANCBQ8NB91 859 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 DNERQ8NFT8 737 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 SEC63Q9UGP8 760 aaKnown RBP23.65■■□□□ 1.38
XRCC3-205ENST00000553807 BRPF3Q9ULD4 1205 aa23.65■■□□□ 1.38
XRCC3-205ENST00000553807 KLF18A0A0U1RQI7 1052 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 MYADML2A6NDP7 307 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 TMTC3Q6ZXV5 915 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 TAAR1Q96RJ0 339 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 MAF1Q9H063 256 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 SPC25Q9HBM1 224 aa23.64■■□□□ 1.37
XRCC3-205ENST00000553807 B4DLN1 442 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 ZBTB43O43298 467 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 EPB41L2O43491 1005 aaKnown RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 CASTP20810 708 aaKnown RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 PTGS1P23219 599 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 HOXA13P31271 388 aaPredicted RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 MRPL12P52815 198 aaKnown RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 IRX5P78411 483 aaPredicted RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 TAPT1Q6NXT6 567 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 Q6ZUG5 572 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 CCDC82Q8N4S0 544 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 RMDN3Q96TC7 470 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 USP26Q9BXU7 913 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 ZMYND8Q9ULU4 1186 aaPredicted RBP23.63■■□□□ 1.37
XRCC3-205ENST00000553807 PHF24Q9UPV7 400 aa23.63■■□□□ 1.37
XRCC3-205ENST00000553807 GOLGA8AA7E2F4 631 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 GOLGA8BA8MQT2 603 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 SMPD1P17405 629 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 RPS6KB1P23443 525 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 EDNRBP24530 442 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 PSMA5P28066 241 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 SMARCA1P28370 1054 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 HSD17B4P51659 736 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 RTN1Q16799 776 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 TLK2Q86UE8 772 aa23.62■■□□□ 1.37
XRCC3-205ENST00000553807 NSUN6Q8TEA1 469 aaKnown RBP23.62■■□□□ 1.37
XRCC3-205ENST00000553807 UPF3AQ9H1J1 476 aaKnown RBP23.62■■□□□ 1.37
XRCC3-205ENST00000553807 A0A1W2PQ45 241 aaPredicted RBP23.61■■□□□ 1.37
XRCC3-205ENST00000553807 A0A1W2PQY0 241 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 hCG_1642624A0A1W2PR95 340 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 EIF2AK2P19525 551 aaKnown RBP23.61■■□□□ 1.37
XRCC3-205ENST00000553807 GJA9P57773 515 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 ARHGEF16Q5VV41 709 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 KLHDC9Q8NEP7 349 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 BRF1Q92994 677 aa23.61■■□□□ 1.37
XRCC3-205ENST00000553807 RBM28Q9NW13 759 aaKnown RBP23.61■■□□□ 1.37
XRCC3-205ENST00000553807 DNAH12Q6ZR08 3092 aa23.6■■□□□ 1.37
XRCC3-205ENST00000553807 GCOM1H8Y6P7 765 aaPredicted RBP23.6■■□□□ 1.37
XRCC3-205ENST00000553807 POLR2MP0CAP2 368 aa23.6■■□□□ 1.37
XRCC3-205ENST00000553807 ACLYP53396 1101 aa23.6■■□□□ 1.37
XRCC3-205ENST00000553807 RTP1P59025 263 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms