RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 OPLAHO14841 1288 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 SPTLC2O15270 562 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 ICAM1P05362 532 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
ABCD4-219ENST00000553745 RILPL1Q5EBL4 403 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
ABCD4-219ENST00000553745 JAKMIP3Q5VZ66 844 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 AGBL1Q96MI9 1066 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 BIN2Q9UBW5 565 aaPredicted RBP16.03■□□□□ 0.16
ABCD4-219ENST00000553745 CCPG1Q9ULG6 757 aa16.03■□□□□ 0.16
ABCD4-219ENST00000553745 WNT7AO00755 349 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 ATP2B1P20020 1258 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.15
ABCD4-219ENST00000553745 HUNKP57058 714 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 COG2Q14746 738 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.15
ABCD4-219ENST00000553745 CPXCR1Q8N123 301 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 RAVER2Q9HCJ3 691 aaKnown RBP16.02■□□□□ 0.15
ABCD4-219ENST00000553745 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 MYPNQ86TC9 1320 aa16.02■□□□□ 0.15
ABCD4-219ENST00000553745 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
ABCD4-219ENST00000553745 ZBED4O75132 1171 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 TRAF1Q13077 416 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 SNAPC2Q13487 334 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 SLC39A14Q15043 492 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 IQCB1Q15051 598 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 KRT25Q7Z3Z0 450 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 REPS2Q8NFH8 660 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 ADAMTS5Q9UNA0 930 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 CTDP1Q9Y5B0 961 aaPredicted RBP16.01■□□□□ 0.15
ABCD4-219ENST00000553745 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 ABCB11O95342 1321 aa16.01■□□□□ 0.15
ABCD4-219ENST00000553745 FDX1P10109 184 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
ABCD4-219ENST00000553745 ZNF165P49910 485 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 MRPL12P52815 198 aaKnown RBP16■□□□□ 0.15
ABCD4-219ENST00000553745 INF2Q27J81 1249 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 USP17L6PQ6QN14 398 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 SMC1BQ8NDV3 1235 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 MEIS2O14770 477 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 NDUFA8P51970 172 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 NONOQ15233 471 aaKnown RBP eCLIP16■□□□□ 0.15
ABCD4-219ENST00000553745 PTPAQ15257 358 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 TTC38Q5R3I4 469 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 GPAT2Q6NUI2 795 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 FASTKD5Q7L8L6 764 aaKnown RBP16■□□□□ 0.15
ABCD4-219ENST00000553745 GLT8D2Q9H1C3 349 aa16■□□□□ 0.15
ABCD4-219ENST00000553745 A0A1B0GVL5 298 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 ALAS1P13196 640 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 CMA1P23946 247 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 IRX3P78415 501 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-219ENST00000553745 TMEM132BQ14DG7 1078 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 STX1AQ16623 288 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 SPRYD7Q5W111 196 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 MS4A4AQ96JQ5 239 aa15.99■□□□□ 0.15
ABCD4-219ENST00000553745 ZNF214Q9UL59 606 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-219ENST00000553745 MRPL11Q9Y3B7 192 aaKnown RBP15.99■□□□□ 0.15
ABCD4-219ENST00000553745 PPP6R2O75170 966 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 ZBTB48P10074 688 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 SAPCD2Q86UD0 394 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 P2RX7Q99572 595 aaKnown RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 ASCC2Q9H1I8 757 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 HOMER2Q9NSB8 354 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 HOXC10Q9NYD6 342 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 NFIBO00712 420 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 CFBP00751 764 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 HOXA13P31271 388 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 GTF2A2P52657 109 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 OAZ1P54368 228 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 CCL15Q16663 113 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 SNRNP48Q6IEG0 339 aaKnown RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 PLA2G4DQ86XP0 818 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 RASAL3Q86YV0 1011 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 CLEC4DQ8WXI8 215 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 TBC1D5Q92609 795 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-219ENST00000553745 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
ABCD4-219ENST00000553745 FAM237AA0A1B0GTK4 181 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 PIK3CDO00329 1044 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 PEX10O60683 326 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 TPM3P06753 285 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 CETPP11597 493 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 MARCKSP29966 332 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-219ENST00000553745 HERVK_113P62684 666 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 AP3B2Q13367 1082 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 ZNF174Q15697 407 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 LBX2Q6XYB7 198 aa15.97■□□□□ 0.15
ABCD4-219ENST00000553745 NEK8Q86SG6 692 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms