RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SRP68Q9UHB9 627 aaKnown RBP8.16□□□□□ -1.1
ATXN3-223ENST00000553686 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 C5P01031 1676 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 FAM221AA4D161 298 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 BPNT1O95861 308 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 EOMESO95936 686 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 F13A1P00488 732 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 PGRP06401 933 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 CAP2P40123 477 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 PDE4BQ07343 736 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 MFSD2AQ8NA29 543 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 RHOVQ96L33 236 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 U3KQE9 123 aa8.15□□□□□ -1.1
ATXN3-223ENST00000553686 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATXN3-223ENST00000553686 CILPO75339 1184 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 SLITRK5O94991 958 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-223ENST00000553686 SERPINB2P05120 415 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 BNIP3Q12983 259 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 TP53INP2Q8IXH6 220 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 GOLM1Q8NBJ4 401 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 HHIPL1Q96JK4 782 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 TJP2Q9UDY2 1190 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
ATXN3-223ENST00000553686 EDC4Q6P2E9 1401 aaKnown RBP8.13□□□□□ -1.11
ATXN3-223ENST00000553686 N4BP2Q86UW6 1770 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-223ENST00000553686 PKD1L3Q7Z443 1732 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 DOT1LQ8TEK3 1739 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 PDE6BP35913 854 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 CRKLP46109 303 aaKnown RBP8.13□□□□□ -1.11
ATXN3-223ENST00000553686 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 FLCNQ8NFG4 579 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 BCL7CQ8WUZ0 217 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-223ENST00000553686 MIPEPQ99797 713 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-223ENST00000553686 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
ATXN3-223ENST00000553686 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 RTL1A6NKG5 1358 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 ERVV-2B6SEH9 535 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 ITIH2P19823 946 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 NOGQ13253 232 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 NFIXQ14938 502 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 CST9Q5W186 159 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 MCATQ8IVS2 390 aaKnown RBP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 VAV3Q9UKW4 847 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
ATXN3-223ENST00000553686 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
ATXN3-223ENST00000553686 TMEM265A0A087WTH1 108 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 CEACAM5P06731 702 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 PLCG1P19174 1290 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 FBLN1P23142 703 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 IRAK1P51617 712 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
ATXN3-223ENST00000553686 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
ATXN3-223ENST00000553686 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 LETMD1Q6P1Q0 360 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 FBXL19Q6PCT2 694 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 SPRED2Q7Z698 418 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 CTU1Q7Z7A3 348 aaKnown RBP8.11□□□□□ -1.11
ATXN3-223ENST00000553686 SAPCD2Q86UD0 394 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 MRPL41Q8IXM3 137 aaKnown RBP8.11□□□□□ -1.11
ATXN3-223ENST00000553686 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-223ENST00000553686 SAGE1Q9NXZ1 904 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 ADAM30Q9UKF2 790 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
ATXN3-223ENST00000553686 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms