RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 LARP6Q9BRS8 491 aaKnown RBP26.41■■□□□ 1.82
TDP1-206ENST00000553569 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.41■■□□□ 1.82
TDP1-206ENST00000553569 ZHX1Q9UKY1 873 aaPredicted RBP26.41■■□□□ 1.82
TDP1-206ENST00000553569 DDX49Q9Y6V7 483 aaKnown RBP26.41■■□□□ 1.82
TDP1-206ENST00000553569 BRCA2P51587 3418 aa26.41■■□□□ 1.82
TDP1-206ENST00000553569 LRRC37A2A6NM11 1700 aa26.4■■□□□ 1.82
TDP1-206ENST00000553569 SNAI1O95863 264 aaPredicted RBP26.4■■□□□ 1.82
TDP1-206ENST00000553569 CDC27P30260 824 aa26.4■■□□□ 1.82
TDP1-206ENST00000553569 TRAF1Q13077 416 aa26.4■■□□□ 1.82
TDP1-206ENST00000553569 FAM217BQ9NTX9 383 aaPredicted RBP26.4■■□□□ 1.82
TDP1-206ENST00000553569 DDX20Q9UHI6 824 aaKnown RBP26.4■■□□□ 1.82
TDP1-206ENST00000553569 ASB14A6NK59 587 aa26.39■■□□□ 1.82
TDP1-206ENST00000553569 CFBP00751 764 aa26.39■■□□□ 1.82
TDP1-206ENST00000553569 ANO1Q5XXA6 986 aa26.39■■□□□ 1.82
TDP1-206ENST00000553569 RGS22Q8NE09 1264 aa26.39■■□□□ 1.82
TDP1-206ENST00000553569 ADD3Q9UEY8 706 aaKnown RBP26.39■■□□□ 1.82
TDP1-206ENST00000553569 NRBP1Q9UHY1 535 aa26.39■■□□□ 1.82
TDP1-206ENST00000553569 NID2Q14112 1375 aa26.38■■□□□ 1.81
TDP1-206ENST00000553569 OPLAHO14841 1288 aa26.38■■□□□ 1.81
TDP1-206ENST00000553569 RGS19P49795 217 aa26.38■■□□□ 1.81
TDP1-206ENST00000553569 ALDH5A1P51649 535 aaPredicted RBP26.38■■□□□ 1.81
TDP1-206ENST00000553569 CRISPLD2Q9H0B8 497 aa26.38■■□□□ 1.81
TDP1-206ENST00000553569 SEPT4O43236 478 aa26.37■■□□□ 1.81
TDP1-206ENST00000553569 ZNF865P0CJ78 1059 aaPredicted RBP26.37■■□□□ 1.81
TDP1-206ENST00000553569 ADD1P35611 737 aaKnown RBP26.37■■□□□ 1.81
TDP1-206ENST00000553569 LHX8Q68G74 356 aa26.37■■□□□ 1.81
TDP1-206ENST00000553569 SYTL5Q8TDW5 730 aaPredicted RBP26.37■■□□□ 1.81
TDP1-206ENST00000553569 IL17RAQ96F46 866 aa26.37■■□□□ 1.81
TDP1-206ENST00000553569 CCDC196A0A1B0GTZ2 297 aa26.36■■□□□ 1.81
TDP1-206ENST00000553569 MSCO60682 206 aa26.36■■□□□ 1.81
TDP1-206ENST00000553569 PDIA3P30101 505 aaKnown RBP26.36■■□□□ 1.81
TDP1-206ENST00000553569 CCT2P78371 535 aaKnown RBP26.36■■□□□ 1.81
TDP1-206ENST00000553569 FUT2Q10981 343 aa26.36■■□□□ 1.81
TDP1-206ENST00000553569 ACVR2BQ13705 512 aa26.36■■□□□ 1.81
TDP1-206ENST00000553569 COL20A1Q9P218 1284 aa26.36■■□□□ 1.81
TDP1-206ENST00000553569 FARP2O94887 1054 aaPredicted RBP26.35■■□□□ 1.81
TDP1-206ENST00000553569 HOXA13P31271 388 aaPredicted RBP26.35■■□□□ 1.81
TDP1-206ENST00000553569 EVCP57679 992 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 PPP2R5BQ15173 497 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 EEPD1Q7L9B9 569 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 HEATR3Q7Z4Q2 680 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 LENG1Q96BZ8 264 aaPredicted RBP26.35■■□□□ 1.81
TDP1-206ENST00000553569 ABHD16BQ9H3Z7 469 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 NCOA5Q9HCD5 579 aaKnown RBP26.35■■□□□ 1.81
TDP1-206ENST00000553569 OGDHLQ9ULD0 1010 aa26.35■■□□□ 1.81
TDP1-206ENST00000553569 HSD17B4P51659 736 aa26.34■■□□□ 1.81
TDP1-206ENST00000553569 STK3Q13188 491 aa26.34■■□□□ 1.81
TDP1-206ENST00000553569 FBXO16Q8IX29 292 aaPredicted RBP26.34■■□□□ 1.81
TDP1-206ENST00000553569 DNERQ8NFT8 737 aa26.34■■□□□ 1.81
TDP1-206ENST00000553569 GPKOWQ92917 476 aaPredicted RBP eCLIP26.34■■□□□ 1.81
TDP1-206ENST00000553569 TAAR1Q96RJ0 339 aa26.34■■□□□ 1.81
TDP1-206ENST00000553569 MAF1Q9H063 256 aa26.34■■□□□ 1.81
TDP1-206ENST00000553569 AKR1A1P14550 325 aa26.33■■□□□ 1.81
TDP1-206ENST00000553569 MLLT1Q03111 559 aaPredicted RBP26.33■■□□□ 1.81
TDP1-206ENST00000553569 NOL8Q76FK4 1167 aaKnown RBP26.33■■□□□ 1.81
TDP1-206ENST00000553569 MPHOSPH6Q99547 160 aaKnown RBP26.33■■□□□ 1.81
TDP1-206ENST00000553569 C22orf23Q9BZE7 217 aa26.33■■□□□ 1.81
TDP1-206ENST00000553569 KATNBL1Q9H079 304 aa26.33■■□□□ 1.81
TDP1-206ENST00000553569 V9GY48 417 aaPredicted RBP26.33■■□□□ 1.81
TDP1-206ENST00000553569 GCOM1H8Y6P7 765 aaPredicted RBP26.32■■□□□ 1.8
TDP1-206ENST00000553569 PPFIA3O75145 1194 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 POLR2MP0CAP2 368 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 NEK4P51957 841 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 AK2P54819 239 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 PDE4DQ08499 809 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 MORC4Q8TE76 937 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 DIS3LQ8TF46 1054 aaKnown RBP26.32■■□□□ 1.8
TDP1-206ENST00000553569 ZNF274Q96GC6 653 aaPredicted RBP26.32■■□□□ 1.8
TDP1-206ENST00000553569 RMDN3Q96TC7 470 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 FAM184BQ9ULE4 1060 aa26.32■■□□□ 1.8
TDP1-206ENST00000553569 LOC102724159A0A0B4J2E5 919 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 MYCNP04198 464 aaPredicted RBP26.31■■□□□ 1.8
TDP1-206ENST00000553569 RARBP10826 455 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 EIF2AK2P19525 551 aaKnown RBP26.31■■□□□ 1.8
TDP1-206ENST00000553569 GHRHRQ02643 423 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 PWP2Q15269 919 aaKnown RBP26.31■■□□□ 1.8
TDP1-206ENST00000553569 CCDC144BQ3MJ40 725 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 ARHGEF16Q5VV41 709 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 WWC2Q6AWC2 1192 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 FCHSD1Q86WN1 690 aa26.31■■□□□ 1.8
TDP1-206ENST00000553569 CAPN2P17655 700 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 ANKRD1Q15327 319 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 SAMD3Q8N6K7 520 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 ANKLE1Q8NAG6 615 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 NSUN6Q8TEA1 469 aaKnown RBP26.3■■□□□ 1.8
TDP1-206ENST00000553569 PHKBQ93100 1093 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 ALDH8A1Q9H2A2 487 aaPredicted RBP26.3■■□□□ 1.8
TDP1-206ENST00000553569 UPF2Q9HAU5 1272 aaKnown RBP26.3■■□□□ 1.8
TDP1-206ENST00000553569 VTA1Q9NP79 307 aa26.3■■□□□ 1.8
TDP1-206ENST00000553569 B4DLN1 442 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 EDNRBP24530 442 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 MRPL12P52815 198 aaKnown RBP26.29■■□□□ 1.8
TDP1-206ENST00000553569 CUL5Q93034 780 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 XPNPEP3Q9NQH7 507 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 PXMP2Q9NR77 195 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 PDGFCQ9NRA1 345 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 MAP3K20Q9NYL2 800 aaKnown RBP26.29■■□□□ 1.8
TDP1-206ENST00000553569 TPCN1Q9ULQ1 816 aa26.29■■□□□ 1.8
TDP1-206ENST00000553569 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.28■■□□□ 1.8
TDP1-206ENST00000553569 ADCY6O43306 1168 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms