RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
DDX23-217ENST00000553065 JMJD4Q9H9V9 463 aa12.4□□□□□ -0.42
DDX23-217ENST00000553065 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
DDX23-217ENST00000553065 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.42
DDX23-217ENST00000553065 VCANP13611 3396 aa12.4□□□□□ -0.42
DDX23-217ENST00000553065 PPP1R11O60927 126 aaPredicted RBP12.39□□□□□ -0.43
DDX23-217ENST00000553065 CYP21A2P08686 494 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
DDX23-217ENST00000553065 PSMC6P62333 389 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 KIAA1211Q6ZU35 1233 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 STOX1Q6ZVD7 989 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
DDX23-217ENST00000553065 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 COPS5Q92905 334 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 Q9Y3F1 56 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
DDX23-217ENST00000553065 UMODL1Q5DID0 1318 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 HIP1O00291 1037 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 ARIH2O95376 493 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 RAG1P15918 1043 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 CALML3P27482 149 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
DDX23-217ENST00000553065 DUSP28Q4G0W2 176 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
DDX23-217ENST00000553065 RASIP1Q5U651 963 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 FAM161BQ96MY7 647 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX23-217ENST00000553065 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 TRPV6Q9H1D0 765 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 STXBP5LQ9Y2K9 1186 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 CHD9Q3L8U1 2897 aa12.38□□□□□ -0.43
DDX23-217ENST00000553065 TNKSO95271 1327 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
DDX23-217ENST00000553065 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
DDX23-217ENST00000553065 CYP2C18P33260 490 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 IMMTQ16891 758 aaKnown RBP12.37□□□□□ -0.43
DDX23-217ENST00000553065 QRICH1Q2TAL8 776 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 USH1GQ495M9 461 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
DDX23-217ENST00000553065 VAT1LQ9HCJ6 419 aa12.37□□□□□ -0.43
DDX23-217ENST00000553065 LOC102724159A0A0B4J2E5 919 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 SGSM2O43147 1006 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 CYTH3O43739 400 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 B4GALT4O60513 344 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 ACRP10323 421 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 CSF2RAP15509 400 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 ANTXR2P58335 489 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 PWP2Q15269 919 aaKnown RBP12.36□□□□□ -0.43
DDX23-217ENST00000553065 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
DDX23-217ENST00000553065 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
DDX23-217ENST00000553065 CHST3Q7LGC8 479 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 VTI1AQ96AJ9 217 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 GPHNQ9NQX3 736 aaPredicted RBP12.36□□□□□ -0.43
DDX23-217ENST00000553065 ADD3Q9UEY8 706 aaKnown RBP12.36□□□□□ -0.43
DDX23-217ENST00000553065 CTNNA3Q9UI47 895 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
DDX23-217ENST00000553065 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 SMAD3P84022 425 aaKnown RBP12.35□□□□□ -0.43
DDX23-217ENST00000553065 PURAQ00577 322 aaKnown RBP12.35□□□□□ -0.43
DDX23-217ENST00000553065 FPGSQ05932 587 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 TROAPQ12815 778 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 CTAGE1Q96RT6 745 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 CDX2Q99626 313 aaPredicted RBP12.35□□□□□ -0.43
DDX23-217ENST00000553065 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 KRT23Q9C075 422 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 WNT8AQ9H1J5 351 aa12.35□□□□□ -0.43
DDX23-217ENST00000553065 A6NJR5 290 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 E7EWF7 191 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 RGS20O76081 388 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
DDX23-217ENST00000553065 PBX2P40425 430 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 NT5C2P49902 561 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 GHRHRQ02643 423 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 ASPRV1Q53RT3 343 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms