RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ZNFX1Q9P2E3 1918 aaKnown RBP8.12□□□□□ -1.11
LETMD1-236ENST00000553043 SRGAP3O43295 1099 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 CYP2D6P10635 497 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 NBL1P41271 181 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 CHMP4BP1P59074 171 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 PURAQ00577 322 aaKnown RBP8.12□□□□□ -1.11
LETMD1-236ENST00000553043 GPNMBQ14956 572 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 COL19A1Q14993 1142 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 TCTN1Q2MV58 587 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 NBPF20Q3BBV1 942 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 CCDC158Q5M9N0 1113 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 FRMD5Q7Z6J6 570 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 FBXO16Q8IX29 292 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-236ENST00000553043 NKD2Q969F2 451 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-236ENST00000553043 RMDN1Q96DB5 314 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 SLF1Q9BQI6 1058 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 GOPCQ9HD26 462 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 GPHNQ9NQX3 736 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-236ENST00000553043 HOMER2Q9NSB8 354 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 Q9Y3F1 56 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 NCOR2Q9Y618 2525 aa8.12□□□□□ -1.11
LETMD1-236ENST00000553043 TPRP12270 2363 aaKnown RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 ABHD14A-ACY1A0A1B0GW23 586 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 H3BNC9 293 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 ZBED4O75132 1171 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 CSPG5O95196 566 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 PDGFBP01127 241 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 SMAD4Q13485 552 aaKnown RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 LRRFIP1Q32MZ4 808 aaKnown RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 TAPT1Q6NXT6 567 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 KIAA1211Q6ZU35 1233 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 PIAS4Q8N2W9 510 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 IGFLR1Q9H665 355 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 NOB1Q9ULX3 412 aaKnown RBP8.11□□□□□ -1.11
LETMD1-236ENST00000553043 INSL6Q9Y581 213 aa8.11□□□□□ -1.11
LETMD1-236ENST00000553043 SCN5AQ14524 2016 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 GVINP1Q7Z2Y8 2422 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 ASB14A6NK59 587 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 NCK2O43639 380 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 NBNO60934 754 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
LETMD1-236ENST00000553043 HYAL1Q12794 435 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 G3BP1Q13283 466 aaKnown RBP eCLIP8.1□□□□□ -1.11
LETMD1-236ENST00000553043 IKBKEQ14164 716 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 CTC1Q2NKJ3 1217 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.1□□□□□ -1.115e-8■■■□□ 15.1
LETMD1-236ENST00000553043 FAM133AQ8N9E0 248 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 CHST13Q8NET6 341 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 SDR42E1Q8WUS8 393 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 CD207Q9UJ71 328 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
LETMD1-236ENST00000553043 CDK5RAP2Q96SN8 1893 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 USP17L12C9JPN9 530 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 USP17L21D6R901 530 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 LINC01565O15544 149 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 TBX10O75333 385 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 GNAI2P04899 355 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 SELPP16109 830 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 NUBP1P53384 320 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 PTGISQ16647 500 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 LRRC8DQ7L1W4 858 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 TMEM192Q8IY95 271 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 MYOCDQ8IZQ8 938 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 PRPF38AQ8NAV1 312 aaKnown RBP8.09□□□□□ -1.11
LETMD1-236ENST00000553043 CAGE1Q8TC20 777 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 AFAP1L1Q8TED9 768 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 RPGRIP1Q96KN7 1286 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 CCDC17Q96LX7 622 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 SAMD11Q96NU1 681 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 MEIS3Q99687 375 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 RIOK1Q9BRS2 568 aaKnown RBP8.09□□□□□ -1.11
LETMD1-236ENST00000553043 KANSL2Q9H9L4 492 aa8.09□□□□□ -1.11
LETMD1-236ENST00000553043 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
LETMD1-236ENST00000553043 CHD8Q9HCK8 2581 aa8.09□□□□□ -1.12
LETMD1-236ENST00000553043 ZFHX4Q86UP3 3567 aa8.09□□□□□ -1.12
LETMD1-236ENST00000553043 MYO15AQ9UKN7 3530 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 LOC730098B7Z3J9 87 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 EFCAB14O75071 495 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 CXCL10P02778 98 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 MS4A1P11836 297 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 TRIM27P14373 513 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 CDK8P49336 464 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 NDUFV1P49821 464 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 CPT1AP50416 773 aa8.08□□□□□ -1.12
LETMD1-236ENST00000553043 PTPN11Q06124 597 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-236ENST00000553043 COL9A2Q14055 689 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms