RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 SLC43A3Q8NBI5 491 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 MORC4Q8TE76 937 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 PPP1R13LQ8WUF5 828 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 TTC14Q96N46 770 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
NEK3-204ENST00000552973 ADD3Q9UEY8 706 aaKnown RBP13.49□□□□□ -0.25
NEK3-204ENST00000552973 ZNF213O14771 459 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 B4GALT4O60513 344 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 MYL3P08590 195 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 USH1GQ495M9 461 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 DUSP28Q4G0W2 176 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 TIFAQ96CG3 184 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 PBX4Q9BYU1 374 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 ZNF576Q9H609 170 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 Q9Y3F1 56 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 COL6A3P12111 3177 aa13.48□□□□□ -0.25
NEK3-204ENST00000552973 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 KCNA4P22459 653 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 RPS6P62753 249 aaKnown RBP13.47□□□□□ -0.25
NEK3-204ENST00000552973 OR6J1Q8NGC5 347 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 ESR2Q92731 530 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 COPS5Q92905 334 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 RNF41Q9H4P4 317 aaPredicted RBP13.47□□□□□ -0.25
NEK3-204ENST00000552973 IL23AQ9NPF7 189 aa13.47□□□□□ -0.25
NEK3-204ENST00000552973 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
NEK3-204ENST00000552973 ZMYM6O95789 1325 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 TMEM265A0A087WTH1 108 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 B4E1Z4 1266 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 KDM4AO75164 1064 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 FGBP02675 491 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.25
NEK3-204ENST00000552973 NUCB1Q02818 461 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 PDE4DQ08499 809 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 PSRC1Q6PGN9 363 aaPredicted RBP13.46□□□□□ -0.25
NEK3-204ENST00000552973 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 TBC1D5Q92609 795 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 SCLYQ96I15 445 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
NEK3-204ENST00000552973 DIAPH3Q9NSV4 1193 aa13.46□□□□□ -0.25
NEK3-204ENST00000552973 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
NEK3-204ENST00000552973 PCP11498 1178 aaKnown RBP13.45□□□□□ -0.26
NEK3-204ENST00000552973 CYP2C9P11712 490 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 DGKHQ86XP1 1220 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 WNT8AQ9H1J5 351 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
NEK3-204ENST00000552973 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 KAT14Q9H8E8 782 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
NEK3-204ENST00000552973 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
NEK3-204ENST00000552973 WDR19Q8NEZ3 1342 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
NEK3-204ENST00000552973 CPT1AP50416 773 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 CHMP4BP1P59074 171 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
NEK3-204ENST00000552973 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
NEK3-204ENST00000552973 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
NEK3-204ENST00000552973 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
NEK3-204ENST00000552973 NKX2-4Q9H2Z4 354 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 PRDM12Q9H4Q4 367 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 POLR3EQ9NVU0 708 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 ZSWIM5Q9P217 1185 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
NEK3-204ENST00000552973 DHX16O60231 1041 aaKnown RBP13.43□□□□□ -0.26
NEK3-204ENST00000552973 ARIH2O95376 493 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 TXNP10599 105 aaKnown RBP13.43□□□□□ -0.26
NEK3-204ENST00000552973 RABGGTBP53611 331 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 AAMPQ13685 434 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 SEPT14Q6ZU15 432 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 ADGRF4Q8IZF3 695 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 TAAR1Q96RJ0 339 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 MPHOSPH6Q99547 160 aaKnown RBP13.43□□□□□ -0.26
NEK3-204ENST00000552973 MTG1Q9BT17 334 aaPredicted RBP13.43□□□□□ -0.26
NEK3-204ENST00000552973 PRDM6Q9NQX0 595 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 MSRAQ9UJ68 235 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
NEK3-204ENST00000552973 MCM3APO60318 1980 aa13.43□□□□□ -0.26
NEK3-204ENST00000552973 TNKSO95271 1327 aa13.42□□□□□ -0.26
NEK3-204ENST00000552973 LOC102724159A0A0B4J2E5 919 aa13.42□□□□□ -0.26
NEK3-204ENST00000552973 ZBBXA8MT70 800 aa13.42□□□□□ -0.26
NEK3-204ENST00000552973 MYOGP15173 224 aa13.42□□□□□ -0.26
NEK3-204ENST00000552973 EDNRBP24530 442 aa13.42□□□□□ -0.26
NEK3-204ENST00000552973 PWP2Q15269 919 aaKnown RBP13.42□□□□□ -0.26
NEK3-204ENST00000552973 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
NEK3-204ENST00000552973 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms