RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, human

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP19-209	ENST00000552872	RIPK3	Q9Y572	518 aa		11.6	□□□□□ -0.55
MMP19-209	ENST00000552872	PCDHA1	Q9Y5I3	950 aa		11.6	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L15	C9J2P7	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L13	C9JLJ4	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L11	C9JVI0	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L18	D6R9N7	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L22	D6RA61	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L17	D6RBQ6	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L19	D6RCP7	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L20	D6RJB6	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	ZBTB5	O15062	677 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	ZSCAN22	P10073	491 aa	Predicted RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	NT5C2	P49902	561 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	GNAQ	P50148	359 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	NLRP5	P59047	1200 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L24	Q0WX57	530 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	USP17L6P	Q6QN14	398 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	RASAL3	Q86YV0	1011 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	MS4A4A	Q96JQ5	239 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	TRERF1	Q96PN7	1200 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	MAP3K14	Q99558	947 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	BIN2	Q9UBW5	565 aa	Predicted RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	TMEM88B	A6NKF7	163 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	BTBD19	C9JJ37	291 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	WNT7A	O00755	349 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	TRIM29	Q14134	588 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	NPY5R	Q15761	445 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	GPAT2	Q6NUI2	795 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	DIS3L2	Q8IYB7	885 aa	Known RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	CCDC112	Q8NEF3	446 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	ZNF397	Q8NF99	534 aa	Predicted RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	LPAR1	Q92633	364 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	C16orf45	Q96MC5	204 aa	Predicted RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	PAXBP1	Q9Y5B6	917 aa		11.59	□□□□□ -0.55
MMP19-209	ENST00000552872	PNMA6F	A0A0J9YX94	578 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	C19orf81	C9J6K1	198 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	DNM1	Q05193	864 aa	Known RBP	11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	SNAPC2	Q13487	334 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	GNL2	Q13823	731 aa	Known RBP	11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	PPP2R5B	Q15173	497 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	JAKMIP3	Q5VZ66	844 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	CATSPERG	Q6ZRH7	1159 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	CREBRF	Q8IUR6	639 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	RBM46	Q8TBY0	533 aa	Known RBP	11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	TXNRD2	Q9NNW7	524 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	BARHL2	Q9NY43	387 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	FAM53C	Q9NYF3	392 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	FEM1B	Q9UK73	627 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	PPP1R9A	Q9ULJ8	1098 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	ZNF536	O15090	1300 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	STK36	Q9NRP7	1315 aa		11.58	□□□□□ -0.56
MMP19-209	ENST00000552872	SMCO2	A6NFE2	343 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	VWA5A	O00534	786 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	F13A1	P00488	732 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	ALAS1	P13196	640 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	PTGS1	P23219	599 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	UBXN2A	P68543	259 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	TMEM132B	Q14DG7	1078 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	MUM1L1	Q5H9M0	696 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	RGMB	Q6NW40	437 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	PRPF38A	Q8NAV1	312 aa	Known RBP	11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	CHURC1	Q8WUH1	139 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	KCNH4	Q9UQ05	1017 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	ATP6V1D	Q9Y5K8	247 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	PDHX	O00330	501 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	NFIB	O00712	420 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	MMP1	P03956	469 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	CCDC192	P0DO97	292 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	KMT5B	Q4FZB7	885 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	FBXO11	Q86XK2	927 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	ZNF592	Q92610	1267 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	LZTS2	Q9BRK4	669 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	PHF20	Q9BVI0	1012 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	BTBD7	Q9P203	1132 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	CCPG1	Q9ULG6	757 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	TLL2	Q9Y6L7	1015 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	LOC285556	D6RIA3	1793 aa		11.57	□□□□□ -0.56
MMP19-209	ENST00000552872	OPLAH	O14841	1288 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	TNNT1	P13805	278 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	FKBP1B	P68106	108 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	KIF23	Q02241	960 aa	Predicted RBP	11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	REST	Q13127	1097 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	COG2	Q14746	738 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	BTNL9	Q6UXG8	535 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	PIK3AP1	Q6ZUJ8	805 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	MTMR8	Q96EF0	704 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	RANBP17	Q9H2T7	1088 aa	Known RBP	11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	GINM1	Q9NU53	330 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	MRVI1	Q9Y6F6	885 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	FAM155A	B1AL88	458 aa	Predicted RBP	11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	CXCL11	O14625	94 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	FIBP	O43427	364 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	CFB	P00751	764 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	PDC	P20941	246 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	DSG3	P32926	999 aa		11.56	□□□□□ -0.56
MMP19-209	ENST00000552872	HNRNPH2	P55795	449 aa	Known RBP	11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms