RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
CACNB3-224ENST00000552812 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
CACNB3-224ENST00000552812 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
CACNB3-224ENST00000552812 BIN2Q9UBW5 565 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-224ENST00000552812 A0A1B0GVL5 298 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 PFKFB1P16118 471 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 VCAM1P19320 739 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 MCM7P33993 719 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
CACNB3-224ENST00000552812 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 AP3B2Q13367 1082 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 JAKMIP3Q5VZ66 844 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 TBCKQ8TEA7 893 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 TIGD1Q96MW7 591 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
CACNB3-224ENST00000552812 POTECB2RU33 542 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 FDX1P10109 184 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-224ENST00000552812 GAS2L3Q86XJ1 694 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
CACNB3-224ENST00000552812 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 CLIC6Q96NY7 704 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 TMEM260Q9NX78 707 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 CSADQ9Y600 493 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 SOCS7O14512 581 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 ZNF202O95125 648 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 PRPHP41219 470 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 SYKP43405 635 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 SNAP25P60880 206 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 VGLL4Q14135 290 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 USH1GQ495M9 461 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 L1TD1Q5T7N2 865 aaKnown RBP12.82□□□□□ -0.36
CACNB3-224ENST00000552812 C4orf32Q8N8J7 132 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 NAP1L4Q99733 375 aaKnown RBP12.82□□□□□ -0.36
CACNB3-224ENST00000552812 OTOFQ9HC10 1997 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 FBXO28Q9NVF7 368 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 AFG3L2Q9Y4W6 797 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
CACNB3-224ENST00000552812 ABCB11O95342 1321 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 MEIS2O14770 477 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 FOSP01100 380 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-224ENST00000552812 ICAM1P05362 532 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 MRE11P49959 708 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 CAMK4Q16566 473 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 UBE2SQ16763 222 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 LETM2Q2VYF4 491 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-224ENST00000552812 SH3D19Q5HYK7 790 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 TSPY26PQ9H489 355 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-224ENST00000552812 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 PPP1R9AQ9ULJ8 1098 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 MRPL11Q9Y3B7 192 aaKnown RBP12.81□□□□□ -0.36
CACNB3-224ENST00000552812 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
CACNB3-224ENST00000552812 NEMFO60524 1076 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
CACNB3-224ENST00000552812 FLOT1O75955 427 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
CACNB3-224ENST00000552812 GRIN1Q05586 938 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 PRKG1Q13976 671 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 PPP4R3AQ6IN85 833 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 ELOA2Q8IYF1 753 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-224ENST00000552812 ANKRD13AQ8IZ07 590 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 FUCA2Q9BTY2 467 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 PARP14Q460N5 1801 aa12.8□□□□□ -0.36
CACNB3-224ENST00000552812 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 OPLAHO14841 1288 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
CACNB3-224ENST00000552812 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP11P51784 963 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 HMGCS2P54868 508 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 CCDC174Q6PII3 467 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 MOXD1Q6UVY6 613 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
CACNB3-224ENST00000552812 SDF4Q9BRK5 362 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms