RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
HCFC2-206ENST00000552343 PIF1Q9H611 641 aa6.04□□□□□ -1.44
HCFC2-206ENST00000552343 CCDC180Q9P1Z9 1646 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 FAM86C2PA6NEL3 165 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 ABLIM1O14639 778 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 DNAJA2O60884 412 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 APPP05067 770 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 ITGA4P13612 1032 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 HSD3B2P26439 372 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 ERVFRD-1P60508 538 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 RBM10P98175 930 aaKnown RBP6.03□□□□□ -1.44
HCFC2-206ENST00000552343 SSRP1Q08945 709 aaKnown RBP6.03□□□□□ -1.44
HCFC2-206ENST00000552343 NBPF12Q5TAG4 269 aaPredicted RBP6.03□□□□□ -1.44
HCFC2-206ENST00000552343 OLFML2BQ68BL8 750 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 POMZP3Q6PJE2 187 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 HHIPL2Q6UWX4 724 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 HOMER1Q86YM7 354 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 FAM177A1Q8N128 213 aaPredicted RBP6.03□□□□□ -1.44
HCFC2-206ENST00000552343 SYNPOQ8N3V7 929 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 THAP3Q8WTV1 239 aaPredicted RBP6.03□□□□□ -1.44
HCFC2-206ENST00000552343 SGSM3Q96HU1 749 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 KLHL14Q9P2G3 628 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 LRP2BPQ9P2M1 347 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 MYRFQ9Y2G1 1151 aa6.03□□□□□ -1.44
HCFC2-206ENST00000552343 CCDC163A0A0D9SF12 145 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
HCFC2-206ENST00000552343 SUSD5O60279 629 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 UBOX5O94941 541 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
HCFC2-206ENST00000552343 ZYXQ15942 572 aaKnown RBP6.02□□□□□ -1.45
HCFC2-206ENST00000552343 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 ADAT2Q7Z6V5 191 aaKnown RBP6.02□□□□□ -1.45
HCFC2-206ENST00000552343 APPBP2Q92624 585 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 HHIPL1Q96JK4 782 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 GPR20Q99678 358 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 FOXP3Q9BZS1 431 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 PRR13Q9NZ81 148 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 TBX22Q9Y458 520 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 PCDHB12Q9Y5F1 795 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 CADPSQ9ULU8 1353 aa6.02□□□□□ -1.45
HCFC2-206ENST00000552343 LTBP3Q9NS15 1303 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 NMIQ13287 307 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-206ENST00000552343 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 SV2CQ496J9 727 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
HCFC2-206ENST00000552343 TMC6Q7Z403 805 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 ZSWIM2Q8NEG5 633 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 ENOX1Q8TC92 643 aaKnown RBP6.01□□□□□ -1.45
HCFC2-206ENST00000552343 SYTL5Q8TDW5 730 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-206ENST00000552343 DNAJC7Q99615 494 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 HAUS7Q99871 368 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 WHRNQ9P202 907 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 FBXL21Q9UKT6 434 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 SUGT1Q9Y2Z0 365 aa6.01□□□□□ -1.45
HCFC2-206ENST00000552343 TMEM82A0PJX8 343 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 ENPP3O14638 875 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 AKAP8O43823 692 aaKnown RBP6□□□□□ -1.45
HCFC2-206ENST00000552343 CDC45O75419 566 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 TP53P04637 393 aaPredicted RBP6□□□□□ -1.45
HCFC2-206ENST00000552343 MPOP05164 745 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 KCNC1P48547 511 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 AUHQ13825 339 aaKnown RBP6□□□□□ -1.45
HCFC2-206ENST00000552343 NBPF9Q3BBW0 867 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 C2orf27AQ580R0 203 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 ZPBP2Q6X784 338 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 TMEM192Q8IY95 271 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 C7orf61Q8IZ16 206 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 PPP1R14AQ96A00 147 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 PCDHB10Q9UN67 800 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 SF3B6Q9Y3B4 125 aaKnown RBP6□□□□□ -1.45
HCFC2-206ENST00000552343 PCDHA5Q9Y5H7 936 aa6□□□□□ -1.45
HCFC2-206ENST00000552343 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 A0A087WZG4 1122 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 FAM221BA6H8Z2 402 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 B2RBV5 119 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 FFAR3O14843 346 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 BUB1BO60566 1050 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-206ENST00000552343 NCKAP1LP55160 1127 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 RTP1P59025 263 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 HSP90AA2PQ14568 343 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-206ENST00000552343 ZFYVE27Q5T4F4 411 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 RNF187Q5TA31 235 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-206ENST00000552343 DAGLBQ8NCG7 672 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 VWCEQ96DN2 955 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 TCTN2Q96GX1 697 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 TCFL5Q9UL49 500 aa5.99□□□□□ -1.45
HCFC2-206ENST00000552343 MRPL42Q9Y6G3 142 aaKnown RBP5.99□□□□□ -1.45
HCFC2-206ENST00000552343 SSU72P8A0A1W2PR75 194 aa5.98□□□□□ -1.45
HCFC2-206ENST00000552343 PPP1R12AO14974 1030 aaPredicted RBP5.98□□□□□ -1.45
HCFC2-206ENST00000552343 FKTNO75072 461 aa5.98□□□□□ -1.45
HCFC2-206ENST00000552343 SLURP1P55000 103 aa5.98□□□□□ -1.45
HCFC2-206ENST00000552343 PCBP3P57721 371 aaKnown RBP5.98□□□□□ -1.45
HCFC2-206ENST00000552343 RAB3GAP1Q15042 981 aa5.98□□□□□ -1.45
HCFC2-206ENST00000552343 SLC10A6Q3KNW5 377 aa5.98□□□□□ -1.45
HCFC2-206ENST00000552343 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
HCFC2-206ENST00000552343 JAZF1Q86VZ6 243 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms