RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	CCDC69	A6NI79	296 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551		E7EWF7	191 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	ZBTB5	O15062	677 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	DDAH1	O94760	285 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	CYP21A2	P08686	494 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	C6orf222	P0C671	652 aa	Predicted RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	SUPT20HL2	P0C7V6	817 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	SLC16A2	P36021	539 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	BAAT	Q14032	418 aa	Predicted RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	STXBP2	Q15833	593 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	DUSP28	Q4G0W2	176 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	TMEM67	Q5HYA8	995 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	PRAMEF19	Q5SWL8	479 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	GJC2	Q5T442	439 aa	Predicted RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	C7orf61	Q8IZ16	206 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	ADGRF4	Q8IZF3	695 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	KLHDC9	Q8NEP7	349 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	TRPV1	Q8NER1	839 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	SCFD2	Q8WU76	684 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	VTI1A	Q96AJ9	217 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	GDF15	Q99988	308 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	GLT8D2	Q9H1C3	349 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	UPF3A	Q9H1J1	476 aa	Known RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	STARD7	Q9NQZ5	370 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	POLR3E	Q9NVU0	708 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	COLQ	Q9Y215	455 aa	Predicted RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	MKI67	P46013	3256 aa	Known RBP	10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	NEDD4	P46934	1319 aa		10.5	□□□□□ -0.73
ATXN2-223	ENST00000551551	ZSWIM8	A7E2V4	1837 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	PLXNB2	O15031	1838 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	PNMA6F	A0A0J9YX94	578 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	CDC45	O75419	566 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	EIF3J	O75822	258 aa	Known RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	ADCYAP1R1	P41586	468 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	ACLY	P53396	1101 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	RCAN1	P53805	252 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	RPS6	P62753	249 aa	Known RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	IRX6	P78412	446 aa	Predicted RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	TTLL4	Q14679	1199 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	SEC23A	Q15436	765 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	KCNA10	Q16322	511 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	LRIT3	Q3SXY7	679 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	XRRA1	Q6P2D8	792 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	DIS3L	Q8TF46	1054 aa	Known RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	CUL5	Q93034	780 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	ZKSCAN3	Q9BRR0	538 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	ESYT1	Q9BSJ8	1104 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	ANO2	Q9NQ90	1003 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	SEC63	Q9UGP8	760 aa	Known RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	RBM8A	Q9Y5S9	174 aa	Known RBP	10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551	BRCA2	P51587	3418 aa		10.49	□□□□□ -0.73
ATXN2-223	ENST00000551551		A0A0U1RQG5	324 aa	Predicted RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	RBM47	A0AV96	593 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	GTPBP6	O43824	516 aa	Predicted RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	ADAMTS4	O75173	837 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	PSMA5	P28066	241 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	ALDH5A1	P51649	535 aa	Predicted RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	RTP1	P59025	263 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	CNTN2	Q02246	1040 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	GHRHR	Q02643	423 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	NECTIN1	Q15223	517 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	CDC37	Q16543	378 aa	Predicted RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	LRRC26	Q2I0M4	334 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	MCTP2	Q6DN12	878 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	TTBK2	Q6IQ55	1244 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	NFXL1	Q6ZNB6	911 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	TDH	Q8IZJ6	230 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	MTMR8	Q96EF0	704 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	RRP36	Q96EU6	259 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	WDR11	Q9BZH6	1224 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	UBE2O	Q9C0C9	1292 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	MTIF3	Q9H2K0	278 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	RIOX1	Q9H6W3	641 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	RBM28	Q9NW13	759 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	PCDHA1	Q9Y5I3	950 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	SLC12A7	Q9Y666	1083 aa		10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.48	□□□□□ -0.73
ATXN2-223	ENST00000551551		A0A1W2PQ45	241 aa	Predicted RBP	10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551		A0A1W2PQY0	241 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	SOWAHB	A6NEL2	793 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	ARVCF	O00192	962 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	PARN	O95453	639 aa	Known RBP	10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	PGK1	P00558	417 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	ASGR1	P07306	291 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	CLTB	P09497	229 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	POLR2M	P0CAP2	368 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	RAG1	P15918	1043 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	EDNRB	P24530	442 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	CALML3	P27482	149 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	PTH1R	Q03431	593 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	PTPN11	Q06124	597 aa	Predicted RBP	10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	TROAP	Q12815	778 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	GRM4	Q14833	912 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	FSCN1	Q16658	493 aa	Known RBP	10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	MUM1L1	Q5H9M0	696 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	ARHGEF16	Q5VV41	709 aa		10.47	□□□□□ -0.73
ATXN2-223	ENST00000551551	DHX32	Q7L7V1	743 aa	Known RBP	10.47	□□□□□ -0.73

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