RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 GCFC2P16383 781 aaKnown RBP13.18□□□□□ -0.3
TROAP-215ENST00000551245 IQCB1Q15051 598 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 E2F4Q16254 413 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 UBE2SQ16763 222 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
TROAP-215ENST00000551245 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
TROAP-215ENST00000551245 USP11P51784 963 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 POSTNQ15063 836 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
TROAP-215ENST00000551245 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
TROAP-215ENST00000551245 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
TROAP-215ENST00000551245 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
TROAP-215ENST00000551245 INPP5BP32019 993 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 PNOCQ13519 176 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
TROAP-215ENST00000551245 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 CEP57L1Q8IYX8 460 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 FEZ1Q99689 392 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 OPLAHO14841 1288 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 CYP3A7P24462 503 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
TROAP-215ENST00000551245 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
TROAP-215ENST00000551245 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
TROAP-215ENST00000551245 SMCHD1A6NHR9 2005 aa13.17□□□□□ -0.3
TROAP-215ENST00000551245 TXLNAP40222 546 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP14P54578 494 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 SNAP25P60880 206 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
TROAP-215ENST00000551245 KLRG1Q96E93 195 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 PTGS1P23219 599 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
TROAP-215ENST00000551245 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 PDILTQ8N807 584 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 IGSF22Q8N9C0 903 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 TRIML1Q8N9V2 468 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 DHX58Q96C10 678 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 GTPBP4Q9BZE4 634 aaKnown RBP13.16□□□□□ -0.3
TROAP-215ENST00000551245 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
TROAP-215ENST00000551245 RBBP6Q7Z6E9 1792 aaKnown RBP13.16□□□□□ -0.3
TROAP-215ENST00000551245 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
TROAP-215ENST00000551245 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 PAGE5Q96GU1 130 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 SCN4AP35499 1836 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 ABCB11O95342 1321 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 RLFQ13129 1914 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 FOXN1O15353 648 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 PTPRAP18433 802 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 PDIA5Q14554 519 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 CALCRLQ16602 461 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 DPCR1Q3MIW9 517 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
TROAP-215ENST00000551245 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
TROAP-215ENST00000551245 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.31
TROAP-215ENST00000551245 SLC37A4O43826 429 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 TDP2O95551 362 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 SREBF1P36956 1147 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 USH1GQ495M9 461 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.31
TROAP-215ENST00000551245 SLF1Q9BQI6 1058 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 PICK1Q9NRD5 415 aa13.15□□□□□ -0.31
TROAP-215ENST00000551245 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.31
TROAP-215ENST00000551245 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 SMC2O95347 1197 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 FDX1P10109 184 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 BACE1P56817 501 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 DRC7Q8IY82 874 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 SMARCE1Q969G3 411 aa13.14□□□□□ -0.31
TROAP-215ENST00000551245 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
TROAP-215ENST00000551245 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms