RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 CD2APQ9Y5K6 639 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
SCN8A-206ENST00000550891 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 ECE1P42892 770 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 JAG1P78504 1218 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 RRP1BQ14684 758 aaKnown RBP17.47■□□□□ 0.39
SCN8A-206ENST00000550891 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
SCN8A-206ENST00000550891 SPATA1Q5VX52 437 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 TMX2Q9Y320 296 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 TBC1D12O60347 775 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 ASNSP08243 561 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 AP3B2Q13367 1082 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 ANKRD20A12PQ8NF67 263 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
SCN8A-206ENST00000550891 SLC37A4O43826 429 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-206ENST00000550891 ACER1Q8TDN7 264 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 ANO3Q9BYT9 981 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 COL4A5P29400 1685 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-206ENST00000550891 NFKBIEO00221 500 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 SKILP12757 684 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
SCN8A-206ENST00000550891 PSME4Q14997 1843 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 RASA3Q14644 834 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 FAM83BQ5T0W9 1011 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
SCN8A-206ENST00000550891 FOSP01100 380 aaPredicted RBP17.45■□□□□ 0.38
SCN8A-206ENST00000550891 CAP2P40123 477 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
SCN8A-206ENST00000550891 PAK1Q13153 545 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 MTMR9Q96QG7 549 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 HSD3B7Q9H2F3 369 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
SCN8A-206ENST00000550891 ASIC1P78348 528 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 CREBRFQ8IUR6 639 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 MTRQ99707 1265 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 USP11P51784 963 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 PDIA5Q14554 519 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 NAALADL2Q58DX5 795 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 SAMSN1Q9NSI8 373 aaKnown RBP17.45■□□□□ 0.38
SCN8A-206ENST00000550891 EXOC1Q9NV70 894 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 KBTBD4Q9NVX7 518 aa17.45■□□□□ 0.38
SCN8A-206ENST00000550891 SV2BQ7L1I2 683 aa17.44■□□□□ 0.38
SCN8A-206ENST00000550891 CTAGE1Q96RT6 745 aa17.44■□□□□ 0.38
SCN8A-206ENST00000550891 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
SCN8A-206ENST00000550891 STK17AQ9UEE5 414 aa17.44■□□□□ 0.38
SCN8A-206ENST00000550891 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
SCN8A-206ENST00000550891 ZNF76P36508 570 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 ARID5BQ14865 1188 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 MAPK8IP1Q9UQF2 711 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 POTEMA6NI47 508 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 GMPSP49915 693 aaPredicted RBP17.43■□□□□ 0.38
SCN8A-206ENST00000550891 SEMA3FQ13275 785 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 DPF2Q92785 391 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
SCN8A-206ENST00000550891 LRRC27Q9C0I9 530 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 SPTLC3Q9NUV7 552 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 KIF13BQ9NQT8 1826 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 PPP1R3GB7ZBB8 358 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 PSMA7O14818 248 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 KCNB1Q14721 858 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 NELFBQ8WX92 580 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 RWDD2AQ9UIY3 292 aa17.43■□□□□ 0.38
SCN8A-206ENST00000550891 SCAF8Q9UPN6 1271 aaKnown RBP17.43■□□□□ 0.38
SCN8A-206ENST00000550891 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 ZNF18P17022 549 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 RASSF7Q02833 373 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 KMT5BQ4FZB7 885 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 CCDC174Q6PII3 467 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
SCN8A-206ENST00000550891 ARHGAP4P98171 946 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 SPAG1Q07617 926 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
SCN8A-206ENST00000550891 ZBED3Q96IU2 234 aaPredicted RBP17.42■□□□□ 0.38
SCN8A-206ENST00000550891 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
SCN8A-206ENST00000550891 GDAQ9Y2T3 454 aa17.42■□□□□ 0.38
SCN8A-206ENST00000550891 ZNF280AP59817 542 aaPredicted RBP17.41■□□□□ 0.38
SCN8A-206ENST00000550891 PDE4DQ08499 809 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 VSTM4Q8IW00 320 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 SLFN12Q8IYM2 578 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 MEIS2O14770 477 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 FCHSD1Q86WN1 690 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 LARP4BQ92615 738 aaKnown RBP17.41■□□□□ 0.38
SCN8A-206ENST00000550891 ZNF341Q9BYN7 854 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 H7C1D1 291 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 CFBP00751 764 aa17.41■□□□□ 0.38
SCN8A-206ENST00000550891 PRR16Q569H4 304 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms