RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 SSH2Q76I76 1423 aa7.58□□□□□ -1.2
PRDM4-206ENST00000550659 MARF1Q9Y4F3 1742 aaKnown RBP7.58□□□□□ -1.2
PRDM4-206ENST00000550659 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PXDNQ92626 1479 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PDE8AO60658 829 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PPM1BO75688 479 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 S100BP04271 92 aaPredicted RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 POU3F3P20264 500 aaPredicted RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 NOL8Q76FK4 1167 aaKnown RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 C7orf61Q8IZ16 206 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PPP1R14AQ96A00 147 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 VWCEQ96DN2 955 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 RCC1LQ96I51 464 aaKnown RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 ZNF512BQ96KM6 892 aaPredicted RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 PANK3Q9H999 370 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 INTS7Q9NVH2 962 aaKnown RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 MAPRE3Q9UPY8 281 aa7.57□□□□□ -1.2
PRDM4-206ENST00000550659 POLR3AO14802 1390 aaPredicted RBP7.57□□□□□ -1.2
PRDM4-206ENST00000550659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 SHOXO15266 292 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 PARNO95453 639 aaKnown RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 PABPC1P11940 636 aaKnown RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 ELNP15502 786 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 CD247P20963 164 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 ADAT2Q7Z6V5 191 aaKnown RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 RNF180Q86T96 592 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 TMEM130Q8N3G9 435 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
PRDM4-206ENST00000550659 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 CLUHP3Q96NS8 147 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 RRAGCQ9HB90 399 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 HOMER2Q9NSB8 354 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 ZNF451Q9Y4E5 1061 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 PIK3C2AO00443 1686 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 KIF1AQ12756 1690 aa7.56□□□□□ -1.2
PRDM4-206ENST00000550659 USP6P35125 1406 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 A0A087WZG4 1122 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 GSG1L2A8MUP6 293 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 ITGA4P13612 1032 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 AUHQ13825 339 aaKnown RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 MAP7Q14244 749 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 TRIM61Q5EBN2 209 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 CT47A1Q5JQC4 288 aaPredicted RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 CCDC181Q5TID7 509 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 POMZP3Q6PJE2 187 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 FERMT3Q86UX7 667 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 JAMLQ86YT9 394 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 TRIM59Q8IWR1 403 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 OSBP2Q969R2 916 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 GP6Q9HCN6 339 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 MAGEC2Q9UBF1 373 aaPredicted RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 COL16A1Q07092 1604 aaPredicted RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 AHDC1Q5TGY3 1603 aaPredicted RBP7.55□□□□□ -1.2
PRDM4-206ENST00000550659 ANKRD36BQ8N2N9 1353 aa7.55□□□□□ -1.2
PRDM4-206ENST00000550659 ALS2Q96Q42 1657 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 NSD3Q9BZ95 1437 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 PRODHO43272 600 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 CDKN1CP49918 316 aaPredicted RBP7.54□□□□□ -1.2
PRDM4-206ENST00000550659 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
PRDM4-206ENST00000550659 LINC00114Q6XXX2 140 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 NME9Q86XW9 330 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 ARHGEF39Q8N4T4 335 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 NGDNQ8NEJ9 315 aaKnown RBP7.54□□□□□ -1.2
PRDM4-206ENST00000550659 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 FBXL18Q96ME1 805 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
PRDM4-206ENST00000550659 ACSS3Q9H6R3 686 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 ENAMQ9NRM1 1142 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 MCM8Q9UJA3 840 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 AKT3Q9Y243 479 aa7.54□□□□□ -1.2
PRDM4-206ENST00000550659 KTN1Q86UP2 1357 aaKnown RBP7.54□□□□□ -1.2
PRDM4-206ENST00000550659 TTC21BQ7Z4L5 1316 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 PHLPP1O60346 1717 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 CRYBG1Q9Y4K1 1723 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
PRDM4-206ENST00000550659 PIK3R2O00459 728 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 TBX1O43435 398 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 FBLN1P23142 703 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 PMLP29590 882 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 GRIA2P42262 883 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 NFKB2Q00653 900 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 CNGB1Q14028 1251 aaPredicted RBP7.53□□□□□ -1.2
PRDM4-206ENST00000550659 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
PRDM4-206ENST00000550659 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms