RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 MENTQ9BUN1 341 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 LGR6Q9HBX8 967 aa6.94□□□□□ -1.3
RAB3IP-213ENST00000550647 TRBV23OR9-2A0A075B6M9 112 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 PRC1O43663 620 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 GLRX3O76003 335 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 CKMP06732 381 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 VAV1P15498 845 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 COL8A1P27658 744 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 RXRBP28702 533 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 RBM10P98175 930 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 ZAR1Q86SH2 424 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 MTDHQ86UE4 582 aaKnown RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 CCDC103Q8IW40 242 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 TCTN2Q96GX1 697 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 DUSP15Q9H1R2 295 aaPredicted RBP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 MKNK2Q9HBH9 465 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
RAB3IP-213ENST00000550647 CBX7O95931 251 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 LSSP48449 732 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 FAPQ12884 760 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 HLTFQ14527 1009 aaKnown RBP eCLIP6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 PPP2R5AQ15172 486 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 NFKBIBQ15653 356 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 SYDE2Q5VT97 1194 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 BEND4Q6ZU67 534 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 CCAR1Q8IX12 1150 aaKnown RBP6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 PCDH19Q8TAB3 1148 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 TRIM8Q9BZR9 551 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 CDH19Q9H159 772 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 TMEFF2Q9UIK5 374 aaPredicted RBP6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 MINPP1Q9UNW1 487 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
RAB3IP-213ENST00000550647 SHTN1A0MZ66 631 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 PRR33A8MZF0 331 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 TRAF5O00463 557 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 AKAP10O43572 662 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 IFNGR1P15260 489 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 ADCYAP1R1P41586 468 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 SEPHS1P49903 392 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 ITKQ08881 620 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 PAK1Q13153 545 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 PIN1Q13526 163 aaPredicted RBP6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 KIZQ2M2Z5 673 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 CYP27C1Q4G0S4 372 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 TSPYL5Q86VY4 417 aaPredicted RBP6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 KSR1Q8IVT5 923 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 CNTD1Q8N815 330 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 DIO2Q92813 273 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 ALG1Q9BT22 464 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 GPRC5CQ9NQ84 441 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
RAB3IP-213ENST00000550647 GABRDO14764 452 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 MAP4K4O95819 1239 aaPredicted RBP6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 SCGB1D2O95969 90 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 PLS3P13797 630 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 RAB27AP51159 221 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 TMPRSS15P98073 1019 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 OCRLQ01968 901 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 CYP27A1Q02318 531 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 RASSF7Q02833 373 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 NXNQ6DKJ4 435 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 OTOP1Q7RTM1 612 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 ZC3H7AQ8IWR0 971 aaKnown RBP6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 CCDC146Q8IYE0 955 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 CHST14Q8NCH0 376 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 MTMR8Q96EF0 704 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 TRHDEQ9UKU6 1024 aa6.9□□□□□ -1.3
RAB3IP-213ENST00000550647 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 GNAT3A8MTJ3 354 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 MEIS1O00470 390 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 MSCO60682 206 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 FBXO21O94952 628 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 FKBP9O95302 570 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 GDF11O95390 407 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 PAMP19021 973 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 ID4P47928 161 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 INAVAQ3KP66 663 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 FKBP9P1Q75LS8 142 aa6.89□□□□□ -1.31
RAB3IP-213ENST00000550647 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms